Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0708
(701 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.8
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.4
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 4.2
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 21 7.4
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 21 7.4
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 9.7
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 9.7
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.7
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 9.7
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 9.7
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +3
Query: 42 FKTEAIRNAVFCVSKNTRNSVHAKWLFSIQTACNVFYQ 155
++ E C++KN+ SVH++ + +++ N +Y+
Sbjct: 90 YRQEVHAQVYVCLAKNSVGSVHSRDV-NVRAVVNQYYE 126
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 215 QW*FFNPFLEEFRLRKQKYSSQLFCVIGY*FSSLPRSSANFG 340
+W F LE+ +K +S+LF + G +LP+ +G
Sbjct: 65 KWRFLLQCLEDLDRSLRKLNSRLFVIRGQPADALPKLFKEWG 106
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect = 4.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 KNTRN--SVHAKWLFSIQTACNVFYQICYCY*LLNAFMVSMRLCRRSGNFSIHFL 242
KN R+ S+ L S+ C +I Y Y + F V + SG F++H L
Sbjct: 30 KNKRSGASLQVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLL 84
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.4 bits (43), Expect = 7.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 98 IPSIFRNAKDCVPYCF 51
+P + K+C+ YCF
Sbjct: 273 LPIVLSIVKNCLSYCF 288
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.4 bits (43), Expect = 7.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 98 IPSIFRNAKDCVPYCF 51
+P + K+C+ YCF
Sbjct: 273 LPIVLSIVKNCLSYCF 288
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.7
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = +2
Query: 269 YSSQLFCVIGY*FSSLPRSSANFGKN*TPSAQDLTKSRSAVVTQNFQLVKIIVA*RPSVV 448
+ S FC+ GY + NF P LT + ++T + I+ R +
Sbjct: 254 FCSLYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKKL 313
Query: 449 LYEV 460
LY +
Sbjct: 314 LYRI 317
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 180 LIINSNNIFDRKHYKLSV 127
++ N NNI ++ HY L V
Sbjct: 102 MVQNHNNIREKSHYCLFV 119
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 94 LVFLETQKTAFRIASVLNTV 35
LVF ET+ F+I SV+ V
Sbjct: 707 LVFSETKLLLFKITSVMIAV 726
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 180 LIINSNNIFDRKHYKLSV 127
++ N NNI ++ HY L V
Sbjct: 102 MVQNHNNIREKSHYCLFV 119
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 9.7
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = +2
Query: 269 YSSQLFCVIGY*FSSLPRSSANFGKN*TPSAQDLTKSRSAVVTQNFQLVKIIVA*RPSVV 448
+ S FC+ GY + NF P LT + ++T + I+ R +
Sbjct: 79 FCSLYFCIFGYIYDDEMVVPQNFHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKKL 138
Query: 449 LYEV 460
LY +
Sbjct: 139 LYRI 142
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,125
Number of Sequences: 336
Number of extensions: 3716
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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