Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0708
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 41 0.005
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 39 0.015
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 39 0.015
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 39 0.015
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 39 0.015
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 39 0.015
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 39 0.015
BC051462-1|AAH51462.2| 458|Homo sapiens transmembrane protein 1... 30 9.2
AK025757-1|BAB15233.1| 354|Homo sapiens protein ( Homo sapiens ... 30 9.2
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 40.7 bits (91), Expect = 0.005
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL +++FF+ L FL K
Sbjct: 242 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLSPTDYHFFKHLDNFLQGK 296
Query: 308 KINTQ 294
+ + Q
Sbjct: 297 RFHNQ 301
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 570 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 624
Query: 308 KINTQ 294
+ + Q
Sbjct: 625 RFHNQ 629
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 243 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 297
Query: 308 KINTQ 294
+ + Q
Sbjct: 298 RFHNQ 302
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 328 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 382
Query: 308 KINTQ 294
+ + Q
Sbjct: 383 RFHNQ 387
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 570 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 624
Query: 308 KINTQ 294
+ + Q
Sbjct: 625 RFHNQ 629
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 570 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 624
Query: 308 KINTQ 294
+ + Q
Sbjct: 625 RFHNQ 629
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
P+L LHDN RPH AQ T+ KL + PH DL+ ++ F+ L+ FL K
Sbjct: 570 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 624
Query: 308 KINTQ 294
+ + Q
Sbjct: 625 RFHNQ 629
>BC051462-1|AAH51462.2| 458|Homo sapiens transmembrane protein 135
protein.
Length = 458
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 402 FCVTTALLDFVRSCADGVQFFPKFAL--LLGKEE 307
FC+T A+ F C DG++ F AL ++GKEE
Sbjct: 158 FCITAAMYMFFFRCKDGLKGFTFSALRFIVGKEE 191
>AK025757-1|BAB15233.1| 354|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22104 fis, clone HEP17633. ).
Length = 354
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 402 FCVTTALLDFVRSCADGVQFFPKFAL--LLGKEE 307
FC+T A+ F C DG++ F AL ++GKEE
Sbjct: 54 FCITAAMYMFFFRCKDGLKGFTFSALRFIVGKEE 87
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,903,206
Number of Sequences: 237096
Number of extensions: 2102381
Number of successful extensions: 3619
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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