Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0708
(701 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 30 0.018
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 27 0.17
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 24 1.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.1
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 4.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.5
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 30.3 bits (65), Expect = 0.018
Identities = 22/58 (37%), Positives = 28/58 (48%)
Frame = -1
Query: 473 HDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRKKIN 300
HDN RPHT+ T KLL + G + PH DL ++ F+SL L K N
Sbjct: 244 HDNARPHTSLVTRQKLL---ELG-WDVLPHPPYSPDLAPSDYFLFRSLQNSLNGKNFN 297
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 273 EYFCFRNLNSSRNGLKNYH 217
+YF FR+L +S NG KN++
Sbjct: 280 DYFLFRSLQNSLNG-KNFN 297
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 27.1 bits (57), Expect = 0.17
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 473 HDNVRPHTAQQTVSKLL 423
HDN RPHT+ T KLL
Sbjct: 122 HDNARPHTSLVTRQKLL 138
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 473 HDNVRPHTAQQTVSKLL 423
HD+ RPHT T KLL
Sbjct: 123 HDDARPHTYLVTRQKLL 139
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 215 QW*FFNPFLEEFRLRKQKYSSQLFCVIGY*FSSLPRSSANFG 340
+W F LE+ +K +S+LF + G +LP+ +G
Sbjct: 69 KWRFLLQCLEDLDCSLRKLNSRLFVIRGQPADALPKLFKEWG 110
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 689 FTLVHLIFLWLRW 651
F ++ IFLWL W
Sbjct: 212 FAMIGTIFLWLFW 224
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 105 NNYKKLQYYNINYIE 119
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 105 NNYKKLQYYNINYIE 119
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 105 NNYKKLQYYNINYIE 119
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 105 NNYKKLQYYNINYIE 119
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 95 NNYKKLQYYNINYIE 109
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 95 NNYKKLQYYNINYIE 109
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 95 NNYKKLQYYNINYIE 109
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 95 NNYKKLQYYNINYIE 109
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 316 NNYKKLQYYNINYIE 330
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 327 NNYKKLQYYNINYIE 341
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 327 NNYKKLQYYNINYIE 341
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 316 NNYKKLQYYNINYIE 330
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 448 HNRRSLSYYNLNKLE 404
+N + L YYN+N +E
Sbjct: 328 NNYKKLQYYNINYIE 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,694
Number of Sequences: 438
Number of extensions: 4097
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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