Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0707
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001618-1|AAN71373.1|  623|Drosophila melanogaster RE35195p pro...    29   3.7  
AY128450-1|AAM75043.1|  459|Drosophila melanogaster LD44026p pro...    29   3.7  
AE014134-1787|AAN10725.1|  623|Drosophila melanogaster CG5694-PB...    29   3.7  
AE014134-1786|AAF52878.2|  623|Drosophila melanogaster CG5694-PA...    29   3.7  

>BT001618-1|AAN71373.1|  623|Drosophila melanogaster RE35195p
           protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 491 KKITFVFFEE*NMSTASRKRPLPSSSNR 408
           K+ T+ F EE +  T++RKR LPS  NR
Sbjct: 258 KQKTYSFSEETSTETSNRKRRLPSRRNR 285


>AY128450-1|AAM75043.1|  459|Drosophila melanogaster LD44026p
           protein.
          Length = 459

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 491 KKITFVFFEE*NMSTASRKRPLPSSSNR 408
           K+ T+ F EE +  T++RKR LPS  NR
Sbjct: 94  KQKTYSFSEETSTETSNRKRRLPSRRNR 121


>AE014134-1787|AAN10725.1|  623|Drosophila melanogaster CG5694-PB,
           isoform B protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 491 KKITFVFFEE*NMSTASRKRPLPSSSNR 408
           K+ T+ F EE +  T++RKR LPS  NR
Sbjct: 258 KQKTYSFSEETSTETSNRKRRLPSRRNR 285


>AE014134-1786|AAF52878.2|  623|Drosophila melanogaster CG5694-PA,
           isoform A protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 491 KKITFVFFEE*NMSTASRKRPLPSSSNR 408
           K+ T+ F EE +  T++RKR LPS  NR
Sbjct: 258 KQKTYSFSEETSTETSNRKRRLPSRRNR 285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,146,951
Number of Sequences: 53049
Number of extensions: 409210
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)