Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0706
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    36   0.040
X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.         34   0.16 
AE013599-73|AAS64775.1|  100|Drosophila melanogaster CG33347-PA ...    32   0.66 
BT022389-1|AAY54805.1|  123|Drosophila melanogaster IP05295p pro...    29   8.1  

>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 36.3 bits (80), Expect = 0.040
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
 Frame = +2

Query: 287 SLMVWLGVSYWGLTEVHFCE*GVKTNAVVYQNTVLTNL-VEPVSHTMFNNR--HWVFQQD 457
           S+M+W  +S  G+ ++ F E     NAV Y + + TNL        +F+N   ++ F QD
Sbjct: 191 SVMIWGCISSHGVGKLAFIE--STMNAVQYLDILKTNLKASAEKFGLFSNNKPNFKFYQD 248

Query: 458 SAPAHRAKSTQDWL 499
           + P H+  + ++WL
Sbjct: 249 NDPKHKEYNVRNWL 262


>X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.
          Length = 339

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +2

Query: 287 SLMVWLGVSYWGLTEVHFCE*GVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAP 466
           ++M W  +SY+G  ++   E  +  N  +    +L N      + +F    W+ QQD+AP
Sbjct: 190 TVMFWGCLSYYGFGDLVPIEGTLNQNGYLL---ILNNHAFTSGNRLFPTTEWILQQDNAP 246

Query: 467 AHRAK 481
            H+ +
Sbjct: 247 CHKGR 251


>AE013599-73|AAS64775.1|  100|Drosophila melanogaster CG33347-PA
           protein.
          Length = 100

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 22/54 (40%), Positives = 26/54 (48%)
 Frame = +2

Query: 290 LMVWLGVSYWGLTEVHFCE*GVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQ 451
           +MVW  VSY+G  E+ F     K NA  Y N VL     P    +F N  W FQ
Sbjct: 50  VMVWGAVSYYGTCEMQFLT--PKMNAKDY-NCVLKTAF-PYFKNVFGNLEWHFQ 99


>BT022389-1|AAY54805.1|  123|Drosophila melanogaster IP05295p
           protein.
          Length = 123

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 539 GQSSCRMKSIYAPLASLVCFSLYELAP 459
           G+ SC + S+ AP+A+L+ F L  L P
Sbjct: 2   GRKSCSLTSLLAPVATLLVFPLLLLLP 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,937,367
Number of Sequences: 53049
Number of extensions: 731845
Number of successful extensions: 1963
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)