Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0704
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_38574| Best HMM Match : WW (HMM E-Value=4.9) 34 0.097
SB_8006| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39284| Best HMM Match : WW (HMM E-Value=7.9) 34 0.13
SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081) 33 0.17
SB_37723| Best HMM Match : RVT_1 (HMM E-Value=0.054) 33 0.17
SB_5514| Best HMM Match : TB (HMM E-Value=4.3) 33 0.22
SB_5462| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_54439| Best HMM Match : SNF (HMM E-Value=0) 33 0.22
SB_51865| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1) 33 0.22
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 33 0.22
SB_23846| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_9383| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_46102| Best HMM Match : RVT_1 (HMM E-Value=2.6e-14) 33 0.30
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 32 0.39
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_23375| Best HMM Match : PCI (HMM E-Value=9.5) 32 0.52
SB_20315| Best HMM Match : RVT_1 (HMM E-Value=1.4e-21) 32 0.52
SB_35235| Best HMM Match : zf-CCCH (HMM E-Value=8) 31 0.68
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_54846| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0) 30 1.6
SB_18416| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31) 30 1.6
SB_36564| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 29 2.8
SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_1670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13) 29 3.6
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 29 3.6
SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94) 29 3.6
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 29 4.8
SB_26710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 29 4.8
SB_24320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 29 4.8
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 29 4.8
SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25) 29 4.8
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.8
SB_48962| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.4
SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43) 28 6.4
SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 28 6.4
SB_12986| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_7633| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_51996| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_51096| Best HMM Match : Baculo_ME53 (HMM E-Value=5.6) 28 6.4
SB_41403| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43) 28 6.4
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_43617| Best HMM Match : RVT_1 (HMM E-Value=3e-21) 28 8.4
SB_43127| Best HMM Match : DUF1690 (HMM E-Value=2.2) 28 8.4
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 28 8.4
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 28 8.4
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 28 8.4
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 28 8.4
SB_35861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8) 28 8.4
SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23) 28 8.4
SB_23115| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 28 8.4
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_8726| Best HMM Match : Pox_F16 (HMM E-Value=5.2) 28 8.4
SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_35765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS V A+ D L+++Q R ++A
Sbjct: 62 ITVYRSLIRSVIEYASAVFANLPNYLSDALENVQRRALKIA 102
>SB_59287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS V A+ D L+++Q R ++A
Sbjct: 62 ITVYRSLIRSVIEYASAVFANLPNYLSDALENVQRRALKIA 102
>SB_38574| Best HMM Match : WW (HMM E-Value=4.9)
Length = 256
Score = 34.3 bits (75), Expect = 0.097
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS+ A+ D L+++Q R ++A
Sbjct: 132 ITVYRSPIRSVIEYASIAFANLQNYLSDVLENVQRRVLKIA 172
>SB_8006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAV-GAPWFVR 284
+T+Y++ IR V+ YAS A+ D L+++Q R ++A G + VR
Sbjct: 99 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIAFPGRSYVVR 148
>SB_39284| Best HMM Match : WW (HMM E-Value=7.9)
Length = 251
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 127 ITVYRSLIRSVIEYASAAFANLPNYLFDALENVQRRALKIA 167
>SB_57709| Best HMM Match : RVT_1 (HMM E-Value=0.00081)
Length = 754
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVGA 299
+T+Y++ IR V+ YAS A+ D L+++Q R ++A A
Sbjct: 575 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIAFPA 618
>SB_37723| Best HMM Match : RVT_1 (HMM E-Value=0.054)
Length = 596
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVGA 299
+T+Y++ IR V+ YAS A+ D L+++Q R ++A A
Sbjct: 444 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIAFPA 487
>SB_5514| Best HMM Match : TB (HMM E-Value=4.3)
Length = 243
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 62 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIA 102
>SB_5462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 213 ITVYRSLIRSVIEYASATFANLPNYLSDALENVQRRTLKIA 253
>SB_54439| Best HMM Match : SNF (HMM E-Value=0)
Length = 701
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 658 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIA 698
>SB_51865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 199 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIA 239
>SB_33864| Best HMM Match : WD40 (HMM E-Value=2.1)
Length = 397
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 273 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIA 313
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 84 ITVYRSLIRSVIEYASAAFANLPNYLSDALENVQRRALKIA 124
>SB_23846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+ +Q R ++A
Sbjct: 59 ITVYRSLIRSVIEYASAAFANLPNYLSDALEDVQRRALKIA 99
>SB_9383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 179 ITVYRSFIRSVIEYASAAFANLPNCLCDDLENVQRRALKIA 219
>SB_46102| Best HMM Match : RVT_1 (HMM E-Value=2.6e-14)
Length = 595
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+++Q R ++A
Sbjct: 480 ITVYRSLIRSVIEYASAAFANFPNYLSDALENVQRRALKIA 520
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 421 YKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFCR 314
YKT +RP + YAS V + ID ++++Q +RFC+
Sbjct: 516 YKTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 554
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 421 YKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFCR 314
YKT +RP + YAS V + ID ++++Q +RFC+
Sbjct: 98 YKTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 136
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 421 YKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFCR 314
YKT +RP + YAS V + ID ++++Q +RFC+
Sbjct: 584 YKTLVRPQLEYASTVWSPHQEYLIDAIEAVQKKAARFCK 622
>SB_23375| Best HMM Match : PCI (HMM E-Value=9.5)
Length = 208
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ D L+ +Q R ++A
Sbjct: 84 ITVYRSLIRSVIEYASEAFANLPNYLSDALEKVQRRALKIA 124
>SB_20315| Best HMM Match : RVT_1 (HMM E-Value=1.4e-21)
Length = 479
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ Y+S A+ D L+++Q R ++A
Sbjct: 382 ITVYRSLIRSVIEYSSAAFANLPNYLSDALENVQRRALKIA 422
>SB_35235| Best HMM Match : zf-CCCH (HMM E-Value=8)
Length = 119
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 701 NPSKK*LRCYFRGEAPHGFPP-GLGGGISHPGLL 603
+P K+ + C F G +P G PP G+ G SH G++
Sbjct: 28 SPCKRDVNCPFHGASPRGMPPSGILGLPSHHGMI 61
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
+T+Y++ IR V+ YAS A+ + L+++Q R ++A
Sbjct: 981 ITVYRSLIRSVIEYASAAFANLPNYLSNALENVQRRALKIA 1021
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSR 323
+ + VT+Y + IRP+ YASV+ ++ + L+ +Q R
Sbjct: 4163 VEDMVTVYCSLIRPITEYASVIFSNIPCYLSEALEKIQRR 4202
>SB_54846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAVT 501
VKYLGV +D ++TF+ HI+ T
Sbjct: 93 VKYLGVLIDKNLTFKYHIEHITT 115
>SB_28356| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1737
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 368 RXPXXHRHPPISTIPLLQVGRW 303
R P +RHP I+ IPLLQ R+
Sbjct: 1247 RHPRYYRHPAITDIPLLQTSRY 1268
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 353 HRHPPISTIPLLQVGRW 303
+RHPPI+ IPLLQ R+
Sbjct: 1337 YRHPPITDIPLLQTSRY 1353
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 368 RXPXXHRHPPISTIPLLQVGRW 303
R P +RHP I+ IPLL+ R+
Sbjct: 1417 RTPSYYRHPAITDIPLLRTSRY 1438
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 422 LQNLHKARHDLRECGDCSRXPXXHRHPPISTIPLLQVGRW 303
LQ H RH + +RHP I+ IPLLQ R+
Sbjct: 1450 LQTSHYYRHSAITDIPLLQTSRYYRHPAITDIPLLQTSRY 1489
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 422 LQNLHKARHDLRECGDCSRXPXXHRHPPISTIPLLQVGRW 303
LQ H RH L + +RHP I+ IPLLQ +
Sbjct: 1280 LQTSHYYRHPLITDTLILQTSHYYRHPTITDIPLLQTSHY 1319
>SB_18416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 436 NKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
+++T Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 118 HRITDYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 162
>SB_11746| Best HMM Match : RVT_1 (HMM E-Value=5e-31)
Length = 323
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAVT 501
VKYLGV +D ++TF+ HI+ T
Sbjct: 257 VKYLGVLIDKNLTFKYHIEHITT 279
>SB_36564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 353 HRHPPISTIPLLQVGRW 303
+RHPPI+ IPLLQ R+
Sbjct: 96 YRHPPITDIPLLQTSRY 112
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 362 PXXHRHPPISTIPLLQVGRW 303
P +RHP I+ IPLLQ R+
Sbjct: 178 PRYYRHPAITDIPLLQTSRY 197
>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 816
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAV 504
+K LGVTLD+S+T++ HI + +
Sbjct: 675 LKILGVTLDSSLTYKEHITTVL 696
>SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAV 504
+K LGVTLD+S+T++ HI + +
Sbjct: 287 LKILGVTLDSSLTYKEHITTVL 308
>SB_1670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXIDTLQSL 332
+T+Y++ IR V+ YAS A+ S D L+++
Sbjct: 99 ITVYRSLIRSVIEYASAAFANLSNYLSDALENV 131
>SB_59170| Best HMM Match : RVT_1 (HMM E-Value=0.13)
Length = 679
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -1
Query: 436 NKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRL 311
N + +Y + +RPV+ YAS V + ++ ++S+Q + R+
Sbjct: 553 NLIQVYCSTMRPVLEYASPVWSALPEYLVELVESVQKKVLRI 594
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 118 RVKVTAYTAIVRPMLEYASAAWDPHLKKDIASLEKVQRKAARFC 161
>SB_15890| Best HMM Match : ArsC (HMM E-Value=0.94)
Length = 310
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -1
Query: 436 NKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRL 311
N + +Y + +RPV+ YAS V + ++ ++S+Q + R+
Sbjct: 184 NLIQVYCSTMRPVLEYASPVWSALPEYLVELVESVQKKVLRI 225
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 909 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 952
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 14 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 57
>SB_26710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAV 504
+K LGVT+D+S++++ HI +A+
Sbjct: 131 LKILGVTMDSSLSYKRHISTAL 152
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 215 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 258
>SB_24320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGAPWFVRNVDLHD 266
L+ + Y I+P+ +YA V AS + + +LQ R RL + A +V L +
Sbjct: 93 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNAEPRAPSVPLFN 152
Query: 265 DL 260
L
Sbjct: 153 KL 154
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 201 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 244
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 447 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 490
>SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 864
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 631 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 674
>SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25)
Length = 863
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 733 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 776
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAV 305
+++ VT+Y + IR + YASV+ + + L+ +Q R ++ +
Sbjct: 2761 VKDMVTVYCSLIRSITEYASVIFPNIPCYLSEALEKIQRRALKIII 2806
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 421 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 464
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 664 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 707
>SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 623 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 666
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 506 RVKVTAYTAIVRPMLEYASAAWDPYLQKDIASLEKVQRKAARFC 549
>SB_18871| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 546
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 439 RNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQ---SRFC 317
R KVT Y +RP++ YAS + I +L+ +Q +RFC
Sbjct: 439 RVKVTAYTAIVRPMLEYASAAWDPHLQKDIASLEKVQRKAARFC 482
>SB_48962| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2225
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = -3
Query: 608 LLSLDNPYPGPRKVKYLGVTLDASMTFRPHIKSAVTVPRLFSIDSTPGSVSRVKCPSEQG 429
+L DN +P + V + S T P++ L+ + G + RVK + G
Sbjct: 1452 VLVADNGHPPQSTEVSITVKIAESKTHPPNVHPLTVYVNLYGSNLNGGVIGRVKATDKDG 1511
Query: 428 DTL 420
D L
Sbjct: 1512 DLL 1514
>SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43)
Length = 593
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 420 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 468
>SB_17448| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 890
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRL 311
+ + VT+Y + IR V YASV+ ++ + L+ +Q R ++
Sbjct: 787 VEDMVTVYCSLIRSVTEYASVIFSNIPCYLSEVLEKIQRRALKI 830
>SB_12986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 95 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 143
>SB_7633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGAPWFVRNVDLHD 266
++ + Y I+P+ +YA V AS + + +LQ R RL + A +V L +
Sbjct: 214 IKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNAEHRAPSVPLFN 273
Query: 265 DL 260
L
Sbjct: 274 RL 275
>SB_51996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 203 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 251
>SB_51096| Best HMM Match : Baculo_ME53 (HMM E-Value=5.6)
Length = 238
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 155 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 203
>SB_41403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1415
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 214 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 262
>SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 430 VTLYKTCIRPVMTYASVVIAHASRXXI-DTLQSLQSRFCRLA 308
+ Y TC+RP++ Y + + H + + L+ +Q R +A
Sbjct: 638 IGFYNTCVRPILEYCAPLFHHTIPAYVKEDLEHIQKRALSIA 679
>SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 130 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 178
>SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43)
Length = 890
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 717 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLSRFLTLQKRAARLILNA 765
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 755 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 798
>SB_43617| Best HMM Match : RVT_1 (HMM E-Value=3e-21)
Length = 314
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 259 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 302
>SB_43127| Best HMM Match : DUF1690 (HMM E-Value=2.2)
Length = 449
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 159 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 202
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 35 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 78
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 121 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 164
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 80 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 123
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 1462 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 1505
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 80 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 123
>SB_35861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 173 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 216
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 446 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 489
>SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8)
Length = 441
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 152 NPDHAGASHSRRPRXVLTDPSDPITFALDAFSSNTRSRLRDP 27
NP G S RRPR +TDP+ + + S+ SR+ P
Sbjct: 189 NPSRTGYSQKRRPR-TITDPTYILRVIESSDSTLPESRVNSP 229
>SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23)
Length = 409
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 259 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 302
>SB_23115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 599 LDNPYPGPRKVKYLGVTLDASMTFRPHIKSAVT 501
+D PY GPR K+L +T + T R I S +T
Sbjct: 20 IDRPYYGPRTNKHLFITAE---TIRKRITSCIT 49
>SB_18362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHAS-RXXIDTLQSLQSRFCRLAVGA 299
L+ + Y I+P+ +YA V AS + + +LQ R RL + A
Sbjct: 90 LKQRTNFYNAMIKPLFSYAGTVWQTASTKDCLTRFLTLQKRAARLILNA 138
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 674 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 717
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 442 LRNKVTLYKTCIRPVMTYASVVIAHA-SRXXIDTLQSLQSRFCRL 311
++ + Y TCIRPV YA V H + + L+ Q R R+
Sbjct: 1219 VKELLLFYLTCIRPVTEYACPVFHHCLPQYLSNDLERCQKRALRI 1263
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 436 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 479
>SB_8726| Best HMM Match : Pox_F16 (HMM E-Value=5.2)
Length = 244
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 433 KVTLYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLAVG 302
K Y + IRPVM YAS V + I+ L+ +Q R G
Sbjct: 141 KERAYFSMIRPVMEYASPVWNPFTDRDINKLEQVQKNAARFVTG 184
>SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 96 IRKDVSRASTVTGSCVIRIRGVVSGGNDKA 185
+R S+ S + G+ V I ++ GGNDKA
Sbjct: 63 VRAHASKNSLILGNAVTHIIQMIVGGNDKA 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,596,332
Number of Sequences: 59808
Number of extensions: 421772
Number of successful extensions: 1319
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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