Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0704
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 29 0.11
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.11
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.11
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 29 0.14
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 29 0.14
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 29 0.19
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 28 0.25
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 28 0.33
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 0.43
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.57
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 25 1.7
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 2.3
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 3.0
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 4.0
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 4.0
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 24 4.0
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 5.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 24 5.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 7.0
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 9.3
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 29.5 bits (63), Expect = 0.11
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 584 PGPRKVKYLGVTLDASMTFRPHIKSAV 504
P R +KYLGV L ++++ PH+K+ +
Sbjct: 740 PFSRTLKYLGVRLHYNLSWVPHVKAVI 766
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.5 bits (63), Expect = 0.11
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 584 PGPRKVKYLGVTLDASMTFRPHIK 513
P R +KYLGV + A +++ PH+K
Sbjct: 801 PFSRSIKYLGVRVHAHLSWVPHVK 824
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 0.11
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIK 513
R ++YLGVTL +++ PH+K
Sbjct: 728 RSIRYLGVTLQDKLSWLPHVK 748
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 29.1 bits (62), Expect = 0.14
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 623 ISHPGLLSLDNPYPGPRKVKYLGVTLDASMTFRPHIKSAV 504
I H + D+ R +KYLG+ LD + + HI+ AV
Sbjct: 691 IQHGAIRVGDHVVHSSRTLKYLGMVLDDRLEYTSHIRYAV 730
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 29.1 bits (62), Expect = 0.14
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIKSA 507
R +KYLGV +D ++FR H++ A
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVEYA 725
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 28.7 bits (61), Expect = 0.19
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIKSAVTVPR 492
R ++YLGVTL +++ PH++ T R
Sbjct: 795 RTMRYLGVTLHDHLSWLPHVREVTTRAR 822
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 28.3 bits (60), Expect = 0.25
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIKSA 507
R +KYLGV +D + F+ H++ A
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLEEA 786
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 27.9 bits (59), Expect = 0.33
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 424 LYKTCIRPVMTYASVVIAHASRXXIDTLQSLQSRFCRLA 308
LY +RP++ YAS++ + ++S+Q F R+A
Sbjct: 820 LYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 27.5 bits (58), Expect = 0.43
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIK 513
R ++YLGV L +++RPH++
Sbjct: 738 RSIRYLGVMLHDHLSWRPHVE 758
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.57
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIKSAVT 501
R ++YLGV +D ++++ H++ T
Sbjct: 749 RSIRYLGVVIDNQLSWKSHVEYCTT 773
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIK 513
R +KYLG+ +D + + HIK
Sbjct: 712 RHLKYLGIMIDDRLEYTQHIK 732
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 569 VKYLGVTLDASMTFRPHIKSAV 504
++YLGV + +RPH+ AV
Sbjct: 734 IRYLGVMIHDHFLWRPHVTMAV 755
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.6 bits (51), Expect = 3.0
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -3
Query: 614 PGLLSLD---NPYPGPRKVKYLGVTLDASMTFRPHIKSAVT 501
P +S+D P R +K+LGV + +++ PH+ +AVT
Sbjct: 732 PSHISIDVRGTAVPYSRSIKHLGVLVHDHLSWIPHV-TAVT 771
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 24.2 bits (50), Expect = 4.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 3 SSSTSTVTGVPKPAPSVRAEGV 68
++S+S TG+P P+ S A+G+
Sbjct: 759 TASSSVSTGMPSPSRSAFADGI 780
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -3
Query: 152 NPDHAGASHSRRPRXVLTDPSDPITFALDAFSSNTRSRLRDP 27
+P S ++R R +L D S+P T F + DP
Sbjct: 1593 SPSKRKDSVTKRDRIILQDESEPNTSQYSTFIHEPKHHQEDP 1634
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 644 PPGLGGGISHPGLLSLDNPYPGP 576
P + GG PG+LS D P P
Sbjct: 1470 PGQISGGEESPGILSDDQPPESP 1492
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 24.2 bits (50), Expect = 4.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 6 SSTSTVTGVPKPAPSVRA 59
++T+T T P PAP++R+
Sbjct: 672 TTTTTTTASPAPAPAIRS 689
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 5.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 517 ICGRNVIDASRVTPRYLTFLGPGYG 591
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.8 bits (49), Expect = 5.3
Identities = 6/21 (28%), Positives = 16/21 (76%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHIK 513
+ ++YLGV + ++++PH++
Sbjct: 735 QSIRYLGVQIHDHLSWKPHVE 755
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 7.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 575 RKVKYLGVTLDASMTFRPHI 516
R ++YLGV L + +R H+
Sbjct: 788 RSIRYLGVQLQDHLKWRDHV 807
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.0 bits (47), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 371 SNHHTRVSHDGPYASFV 421
S+HH+ SH GP S +
Sbjct: 1341 SSHHSSSSHGGPTPSII 1357
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,948
Number of Sequences: 2352
Number of extensions: 13344
Number of successful extensions: 85
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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