Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0703
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   6.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.3  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -1

Query: 302 SICAQLYQFRND*FDYIKFYHKTYLHVHKNNCIFIY 195
           ++C  +Y +R     Y  F+H+  L   +N C F+Y
Sbjct: 114 TLCYAVYYWRQQ---YEDFWHRYTLSFIENYCQFLY 146


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 380 CIIIFHKIVFNMHECY 427
           C+I F+ IVF+   CY
Sbjct: 261 CLIQFNTIVFSFCYCY 276


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 401  IVFNMHECYRKL*NIDTARKLINQIAT 481
            +V   H CY  +  +  + +LI++IAT
Sbjct: 922  VVCICHVCYSTIQEVSKSGELIHKIAT 948


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 HLFLITTSSKFIWMKCQLY 562
           HLF++T  +  +W K  +Y
Sbjct: 52  HLFIVTHQAYELWFKQIIY 70


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 HLFLITTSSKFIWMKCQLY 562
           HLF++T  +  +W K  +Y
Sbjct: 52  HLFIVTHQAYELWFKQIIY 70


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 506 HLFLITTSSKFIWMKCQLY 562
           HLF++T  +  +W K  +Y
Sbjct: 52  HLFIVTHQAYELWFKQIIY 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,188
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)