Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0700
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 635  ISGCVIESEPVVLSSLLYANMV 700
            +SGC+I +E + + SL++   +
Sbjct: 1162 LSGCIIFTEGIWICSLIHRKKI 1183


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 153  WISEK*NTFYLLFKIAVSFNLNSNLVLI 236
            W S   N   +LF + V F   SN+ LI
Sbjct: 944  WTSFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 153  WISEK*NTFYLLFKIAVSFNLNSNLVLI 236
            W S   N   +LF + V F   SN+ LI
Sbjct: 944  WTSFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 153  WISEK*NTFYLLFKIAVSFNLNSNLVLI 236
            W S   N   +LF + V F   SN+ LI
Sbjct: 944  WTSFYYNIIPILFFMLVCFTCKSNIQLI 971


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 153  WISEK*NTFYLLFKIAVSFNLNSNLVLI 236
            W S   N   +LF + V F   SN+ LI
Sbjct: 944  WTSFYYNIIPILFFMLVCFTCKSNIQLI 971


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 107 DKKFMLHLFSFLMPNMDK*KMKYIL 181
           D  +   +F+FLM  +   K +Y+L
Sbjct: 570 DLMYEFQIFTFLMSLLQSIKRRYVL 594


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,069
Number of Sequences: 336
Number of extensions: 3010
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)