Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0700
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   4.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.4  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -3

Query: 701 PPCLHTVNWI--KQPVQI 654
           PPC  +V WI  K+P+++
Sbjct: 203 PPCSESVTWILFKEPIEV 220


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 201  RLF*TKDKMYFIFHLSILGIKKEKRCNMNFLSGRFSKKRTASN 73
            RLF   D    + H++   +++ KR   NF     S  RT  +
Sbjct: 3191 RLFEYVDSWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTKD 3233


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 177 MYFIFHLSILGIKKEKRCNMNFLSGRFSKKRT 82
           +YFI  + ILG        +  LSG FSK+RT
Sbjct: 358 VYFI-SMVILGAFFVMNLILGVLSGEFSKERT 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,371
Number of Sequences: 2352
Number of extensions: 10677
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)