Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0700
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 693 FAYSKLDKTTGS-DSITHPDISWPGDYYI*YH 601
           + +SK DK     +  T  +I+ P DYY  YH
Sbjct: 148 YEFSKYDKLKKKLEEWTGKNITTPWDYYYIYH 179


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 693 FAYSKLDKTTGS-DSITHPDISWPGDYYI*YH 601
           + +SK DK     +  T  +I+ P DYY  YH
Sbjct: 163 YEFSKYDKLKKKLEEWTGKNITTPWDYYYIYH 194


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 693 FAYSKLDKTTGS-DSITHPDISWPGDYYI*YH 601
           + +SK DK     +  T  +I+ P DYY  YH
Sbjct: 51  YEFSKYDKLKKKLEEWTGKNITTPWDYYYIYH 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,806
Number of Sequences: 438
Number of extensions: 3265
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)