Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0697
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2766|AAN13823.2|  386|Drosophila melanogaster CG31208-P...    30   3.5  
DQ138848-1|ABA86454.1| 1047|Drosophila melanogaster CG32217 prot...    29   8.0  
AF416770-1|AAL13036.1| 1060|Drosophila melanogaster ELL protein.       29   8.0  
AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-P...    29   8.0  

>AE014297-2766|AAN13823.2|  386|Drosophila melanogaster CG31208-PA
           protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 328 VNNAPNSTH*CFCCFRSLFY---FFHNIILPLFYNEAIYVVHNFSTLSFEYYTSLSRHS- 495
           +    N    C   +R +++    FH + +PL +   IY V   + + F        +S 
Sbjct: 229 IRRVQNRLEKCISLYREIYHTSIMFHKLFVPLLFLALIYKVLLIALIGFNVAVEFYLNSF 288

Query: 496 VFFIKINKH 522
           +F+I + KH
Sbjct: 289 IFWILLGKH 297


>DQ138848-1|ABA86454.1| 1047|Drosophila melanogaster CG32217
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 420 IKQGKNDIMEKVKQTSEATKTSVSTVRCIINEAKGSGL 307
           IK  ++DI  KVK+   A ++S ST     + +  SGL
Sbjct: 165 IKPNQSDIGRKVKKPPSAIQSSASTASAFSSNSSNSGL 202


>AF416770-1|AAL13036.1| 1060|Drosophila melanogaster ELL protein.
          Length = 1060

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 420 IKQGKNDIMEKVKQTSEATKTSVSTVRCIINEAKGSGL 307
           IK  ++DI  KVK+   A ++S ST     + +  SGL
Sbjct: 172 IKPNQSDIGRKVKKPPSAIQSSASTASAFSSNSSNSGL 209


>AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-PA
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 420 IKQGKNDIMEKVKQTSEATKTSVSTVRCIINEAKGSGL 307
           IK  ++DI  KVK+   A ++S ST     + +  SGL
Sbjct: 172 IKPNQSDIGRKVKKPPSAIQSSASTASAFSSNSSNSGL 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,085,756
Number of Sequences: 53049
Number of extensions: 534727
Number of successful extensions: 1553
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)