Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0696
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 138 9e-33
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 138 9e-33
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 138 9e-33
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 128 7e-30
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 125 5e-29
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 125 5e-29
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 31 1.4
AY122171-1|AAM52683.1| 1653|Drosophila melanogaster LD29171p pro... 29 7.7
AE014134-2399|AAN10848.1| 1614|Drosophila melanogaster CG7578-PB... 29 7.7
AE014134-2398|AAF53331.2| 1653|Drosophila melanogaster CG7578-PA... 29 7.7
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 138 bits (333), Expect = 9e-33
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +1
Query: 10 VNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 189
VNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDL
Sbjct: 49 VNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDL 108
Query: 190 TTDKLRWMVKKWQTLIEANIDVR 258
TTDK R MVKKWQTLIEA ++ +
Sbjct: 109 TTDKYRSMVKKWQTLIEAIVEAK 131
Score = 83.8 bits (198), Expect = 2e-16
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVV 428
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 138 bits (333), Expect = 9e-33
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +1
Query: 10 VNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 189
VNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDL
Sbjct: 49 VNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDL 108
Query: 190 TTDKLRWMVKKWQTLIEANIDVR 258
TTDK R MVKKWQTLIEA ++ +
Sbjct: 109 TTDKYRSMVKKWQTLIEAIVEAK 131
Score = 125 bits (302), Expect = 5e-29
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 434
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 435 LIPDSIAKDIEKACHGIYPLRDVCIER*KC*RGP 536
L DSIAKDIEK+C IYPL DV I + K + P
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +2
Query: 509 RKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPV 640
RKVKVLK+PRF++SKL+ELH SE RPEGYEPPV
Sbjct: 216 RKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPV 264
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 138 bits (333), Expect = 9e-33
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +1
Query: 10 VNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 189
VNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDL
Sbjct: 49 VNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDL 108
Query: 190 TTDKLRWMVKKWQTLIEANIDVR 258
TTDK R MVKKWQTLIEA ++ +
Sbjct: 109 TTDKYRSMVKKWQTLIEAIVEAK 131
Score = 125 bits (302), Expect = 5e-29
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 434
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 131 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 190
Query: 435 LIPDSIAKDIEKACHGIYPLRDVCIER*KC*RGP 536
L DSIAKDIEK+C IYPL DV I + K + P
Sbjct: 191 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 224
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +2
Query: 509 RKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPV 640
RKVKVLK+PRF++SKL+ELH SE RPEGYEPPV
Sbjct: 216 RKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPV 264
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 128 bits (309), Expect = 7e-30
Identities = 64/84 (76%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +1
Query: 10 VNRTQGTKIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 186
VNRTQG +IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMD
Sbjct: 49 VNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMD 108
Query: 187 LTTDKLRWMVKKWQTLIEANIDVR 258
LTTDK R MVKKWQTLIEA ++ +
Sbjct: 109 LTTDKYRSMVKKWQTLIEAIVEAK 132
Score = 119 bits (287), Expect = 3e-27
Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSELREVVN 431
KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VN
Sbjct: 132 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVN 191
Query: 432 KLIPDSIAKDIEKACHGIYPLRDVCIER*KC*RGP 536
KL DSIAKDIEK+C IYPL DV I + K + P
Sbjct: 192 KLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 226
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2
Query: 509 RKVKVLKRPRFEISKLMELH 568
RKVKVLK+PRF++SKL+ELH
Sbjct: 218 RKVKVLKKPRFDVSKLLELH 237
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 125 bits (302), Expect = 5e-29
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 434
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 26 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 85
Query: 435 LIPDSIAKDIEKACHGIYPLRDVCIER*KC*RGP 536
L DSIAKDIEK+C IYPL DV I + K + P
Sbjct: 86 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 119
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +2
Query: 509 RKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPV 640
RKVKVLK+PRF++SKL+ELH SE RPEGYEPPV
Sbjct: 111 RKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPV 159
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 181 MDLTTDKLRWMVKKWQTLIEANIDVR 258
MDLTTDK R MVKKWQTLIEA ++ +
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAK 26
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 125 bits (302), Expect = 5e-29
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = +3
Query: 255 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 434
KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNK
Sbjct: 81 KTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNK 140
Query: 435 LIPDSIAKDIEKACHGIYPLRDVCIER*KC*RGP 536
L DSIAKDIEK+C IYPL DV I + K + P
Sbjct: 141 LALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKP 174
Score = 117 bits (281), Expect = 2e-26
Identities = 56/68 (82%), Positives = 59/68 (86%)
Frame = +1
Query: 55 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 234
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 235 IEANIDVR 258
IEA ++ +
Sbjct: 74 IEAIVEAK 81
Score = 51.6 bits (118), Expect = 1e-06
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +2
Query: 509 RKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPV 640
RKVKVLK+PRF++SKL+ELH SE RPEGYEPPV
Sbjct: 166 RKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPV 214
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -3
Query: 530 SSTLSPFDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 360
++TL AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 258 NATLMDTSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
>AY122171-1|AAM52683.1| 1653|Drosophila melanogaster LD29171p
protein.
Length = 1653
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 558 WNFTAKAVEARGKPETSLNGRRATSLPFQESV*LNNENN 674
+N K E+ G+PE +LNG +S +SV L++EN+
Sbjct: 263 YNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEND 301
>AE014134-2399|AAN10848.1| 1614|Drosophila melanogaster CG7578-PB,
isoform B protein.
Length = 1614
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 558 WNFTAKAVEARGKPETSLNGRRATSLPFQESV*LNNENN 674
+N K E+ G+PE +LNG +S +SV L++EN+
Sbjct: 263 YNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEND 301
>AE014134-2398|AAF53331.2| 1653|Drosophila melanogaster CG7578-PA,
isoform A protein.
Length = 1653
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 558 WNFTAKAVEARGKPETSLNGRRATSLPFQESV*LNNENN 674
+N K E+ G+PE +LNG +S +SV L++EN+
Sbjct: 263 YNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEND 301
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,684,156
Number of Sequences: 53049
Number of extensions: 647535
Number of successful extensions: 1916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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