Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0694
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = -3

Query: 277 IALFYLSAIVVFLYMLYHFHTVDLLCVCKSSSV*IIYSFHTI 152
           I  FY + I+  +++L++   + LLC+       I+++ H +
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLL 253


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -2

Query: 449 VGQFRWRVHPAHRAVVFFENRPQFCIFNTY*PKK 348
           +  F W +  +H      E+ P    +  Y PKK
Sbjct: 239 LNSFHWHITDSHSFPFTAESLPDLTKYGAYSPKK 272


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 647 VLHLTNIQGCVNNKDKYVVSICTWFA 570
           V HL+NI+ C+N    YV  I T F+
Sbjct: 320 VNHLSNIEDCLN----YVPHISTGFS 341


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 14/50 (28%), Positives = 18/50 (36%)
 Frame = -3

Query: 328 PSKTFHGCTFNAY*QKKIALFYLSAIVVFLYMLYHFHTVDLLCVCKSSSV 179
           P   FH  T          L Y+S  +    +L   H +D    C  SSV
Sbjct: 446 PHYGFHNVTNTTLQNLTPQLNYISMKLQSFPLLSQRHQIDAKMFCNESSV 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,246
Number of Sequences: 336
Number of extensions: 3091
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)