Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0694
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.7  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   5.3  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 303  VQPWNVFEGYYIVHSFFGLI 362
            ++PWN+F+   ++ S  GL+
Sbjct: 1683 IEPWNLFDFVVVILSILGLV 1702



 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 324 EGYYIVHSFFGLISIKYTKLWPVFEEYYSSMGR 422
           +G  ++ SF  L   K  K WP      S MGR
Sbjct: 893 QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGR 925


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 421 GCTRQRNCPTKLDLKTKLAFVTLVRNQQSWR 513
           G  R+   PT LD  T+L   +++  +  W+
Sbjct: 235 GLIREIVAPTALDASTRLLMASVINFKGKWK 265


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 416 HRAVVFFENRPQFCIFNTY*PK 351
           H  VV + +RP +  FN Y P+
Sbjct: 82  HNYVVAYIDRPTYAAFNEYLPR 103


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 416 HRAVVFFENRPQFCIFNTY*PK 351
           H  VV + +RP +  FN Y P+
Sbjct: 82  HNYVVAYIDRPTYAAFNEYLPR 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,696
Number of Sequences: 2352
Number of extensions: 11964
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)