Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0694
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    30   1.8  
AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical ...    28   5.6  
AF025452-7|AAB70941.2|  335|Caenorhabditis elegans Serpentine re...    27   9.8  

>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 CGLFSKNTTALWAGCTRQRNCPTKL 456
           CG+   +T   W+G T QR C T L
Sbjct: 244 CGIIGASTETSWSGSTTQRPCDTHL 268


>AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical
           protein F52F10.4 protein.
          Length = 692

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -3

Query: 391 TGHSFVYLILINPKKECTM*YPSKTFHGCTFNAY*QKKIALFYLSAIVV 245
           TGHSF+YLIL +   E  + +P+  ++    NA+       F LS IVV
Sbjct: 261 TGHSFLYLILAD-TLEPVLDFPTYFWNHLLLNAF-VSVDTFFVLSGIVV 307


>AF025452-7|AAB70941.2|  335|Caenorhabditis elegans Serpentine
           receptor, class i protein28 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 238 YMLYHFHTVDLLCVCKSSSV*IIYSFHT 155
           +M+YHF+T   + VC +  V  +  FH+
Sbjct: 14  HMIYHFYTTGTIAVCLNILVIYLILFHS 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,170,847
Number of Sequences: 27780
Number of extensions: 272094
Number of successful extensions: 549
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)