Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0692
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p pro...    33   0.36 
AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine...    33   0.36 
AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA ...    33   0.36 
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    32   0.62 
AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA spli...    30   2.5  
AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,...    30   2.5  
AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,...    30   2.5  
AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,...    30   2.5  

>BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p
           protein.
          Length = 408

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 526 LFISSVAAQKAASNGFEIKAYDFPARKEECRETSHCKIRASYNILLAIST 675
           L + + A   A  NGF+IK Y F AR+E+ R+    ++ A  N ++  +T
Sbjct: 60  LELPTSAKDIAEQNGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTT 109


>AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine
           synthase protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 526 LFISSVAAQKAASNGFEIKAYDFPARKEECRETSHCKIRASYNILLAIST 675
           L + + A   A  NGF+IK Y F AR+E+ R+    ++ A  N ++  +T
Sbjct: 38  LELPTSAKDIAEQNGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTT 87


>AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA
           protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 526 LFISSVAAQKAASNGFEIKAYDFPARKEECRETSHCKIRASYNILLAIST 675
           L + + A   A  NGF+IK Y F AR+E+ R+    ++ A  N ++  +T
Sbjct: 38  LELPTSAKDIAEQNGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTT 87


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -3

Query: 617  RHSSFLAGKS*AFISNPLLAAFWAATELINKAHWSILHSEF 495
            R  +F++G + A +S P +AA+ A TE   KAH  + H EF
Sbjct: 1482 RADAFISGLAEARVSEPPVAAWLALTERYCKAHNLMWHQEF 1522


>AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA splice
           variant 3 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 90  SHLSSLDSF--EIKIEVAVQISNHIHHSSTTFNI 185
           SH SS +S    I++E+    +NHIHH  TT+++
Sbjct: 35  SHFSSGESVCSGIEVEIENNNNNHIHHGETTYHM 68


>AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,
           isoform H protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 90  SHLSSLDSF--EIKIEVAVQISNHIHHSSTTFNI 185
           SH SS +S    I++E+    +NHIHH  TT+++
Sbjct: 35  SHFSSGESVCSGIEVEIENNNNNHIHHGETTYHM 68


>AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,
           isoform G protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 90  SHLSSLDSF--EIKIEVAVQISNHIHHSSTTFNI 185
           SH SS +S    I++E+    +NHIHH  TT+++
Sbjct: 35  SHFSSGESVCSGIEVEIENNNNNHIHHGETTYHM 68


>AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,
           isoform F protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 90  SHLSSLDSF--EIKIEVAVQISNHIHHSSTTFNI 185
           SH SS +S    I++E+    +NHIHH  TT+++
Sbjct: 35  SHFSSGESVCSGIEVEIENNNNNHIHHGETTYHM 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,199,039
Number of Sequences: 53049
Number of extensions: 488858
Number of successful extensions: 994
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)