Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0691
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    29   0.16 
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   3.5  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   8.1  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -1

Query: 82  GRQRLGSAPGIAEVHWRR*PP 20
           GR R G  PG AE H RR PP
Sbjct: 319 GRLRTGPVPGAAERHRRRRPP 339


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 263 NSYTQRNVLFSQKRITRKMLVKAQCLGKIASIKESERELTR 385
           NS TQ++ LFS  R    +++       IAS K++  +L R
Sbjct: 118 NSITQQSELFSLGRYEMFLVMSPLLFSHIASTKDAGYKLYR 158


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 499 NLYIIREAKTLYPFLR*LRGRRSMKFSTP 585
           N   + + K+ YP L+ L G    KFS P
Sbjct: 89  NYRTVTQLKSKYPSLKVLLGLGGYKFSEP 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,856
Number of Sequences: 2352
Number of extensions: 12278
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)