Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0690
(622 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 47 1e-07
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.68
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.68
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.68
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.68
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.89
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 24 1.2
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 24 1.2
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 2.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.1
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 2.7
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 2.7
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 2.7
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 2.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 6.3
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 6.3
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 6.3
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 6.3
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 6.3
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 8.3
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 8.3
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 46.8 bits (106), Expect = 1e-07
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C+++V TPGR+ D + R + N++K FVLDEAD ML
Sbjct: 286 CHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRML 322
Score = 41.5 bits (93), Expect = 6e-06
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQI 403
+L GRD+++ AQ+G+GKTA F + I+ + + + + +I++PTRELA QI
Sbjct: 192 ILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQI 251
Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ K GGT+ ++ G
Sbjct: 252 ADQGKKFAYNSTVKVAVIYGGTSTNHQRGRILGG 285
Score = 28.7 bits (61), Expect = 0.042
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 147 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+ +F+ L+ LL + G+ KP+AIQ+ AI
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAI 189
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.68
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 319 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.68
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 319 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.68
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 319 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.68
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 319 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 423
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.89
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 496 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 353
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 23.8 bits (49), Expect = 1.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 123 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCSKD 263
L +DWD +DD +++G GF+ P +IQ + SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.8 bits (49), Expect = 1.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 123 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCSKD 263
L +DWD +DD +++G GF+ P +IQ + SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 370 PGSHKRAGPTNSEGGDSSW 426
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 370 PGSHKRAGPTNSEGGDSSW 426
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 22.6 bits (46), Expect = 2.7
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +1
Query: 460 WWHQCP*RYSPTGEW 504
WW + +Y P GE+
Sbjct: 96 WWQELQEKYDPKGEY 110
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WWHQCP*RYSPTG 498
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 404 QKVVIALGDHLNAKCHAC 457
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 460 WWHQCP*RYSPTG 498
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.8
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = +3
Query: 12 MSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 155
+ ++ ER+ DWP E+ K G S+ P P P + W T
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.3
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 457 HWWHQCP*RYSPTGEW 504
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.3
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 457 HWWHQCP*RYSPTGEW 504
+WW + ++ P GE+
Sbjct: 96 NWWQELEAKFDPKGEY 111
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.3
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 457 HWWHQCP*RYSPTGEW 504
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 108 FPEVHRNYLDPSMAHFW 58
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -3
Query: 179 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 69
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 82 KVVTMDLREWTLGHLT 129
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 82 KVVTMDLREWTLGHLT 129
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,569
Number of Sequences: 336
Number of extensions: 3864
Number of successful extensions: 26
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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