Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0690
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 124 6e-29
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 122 2e-28
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 120 9e-28
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 119 2e-27
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 77 1e-14
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 76 3e-14
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 75 5e-14
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 75 5e-14
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 67 1e-11
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 66 2e-11
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 61 8e-10
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 58 4e-09
03_05_0865 - 28365430-28367640 57 1e-08
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 56 2e-08
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 56 2e-08
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 56 2e-08
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 56 2e-08
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 56 3e-08
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 56 3e-08
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 56 3e-08
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 55 4e-08
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 55 4e-08
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 55 4e-08
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 55 5e-08
08_01_0397 - 3509186-3510291,3510322-3512335 52 3e-07
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 52 3e-07
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 52 4e-07
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 52 4e-07
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 52 5e-07
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 51 6e-07
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 51 9e-07
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 50 1e-06
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 49 3e-06
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 49 3e-06
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 49 3e-06
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 48 6e-06
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 47 1e-05
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 45 4e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 45 4e-05
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 44 7e-05
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 44 1e-04
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 44 1e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 43 2e-04
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 41 7e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 40 0.001
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 40 0.001
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 40 0.002
03_02_0189 - 6253659-6255380 39 0.004
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 38 0.006
06_03_1255 + 28780181-28781172,28782065-28782932 38 0.008
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 36 0.026
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 36 0.034
02_01_0381 - 2764331-2764342,2768966-2769907 35 0.045
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 32 0.32
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 31 0.74
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 1.7
08_02_0230 - 14572854-14574632 29 3.0
04_03_0653 - 18429736-18431379 29 3.0
11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 27 9.1
09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 27 9.1
08_02_1433 - 27063626-27064135 27 9.1
08_01_0663 + 5721902-5723176,5724162-5724233,5724405-5724560,572... 27 9.1
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 124 bits (299), Expect = 6e-29
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 436
+G DVI QAQSGTGKTATF ILQQ+D ++ ECQAL+LAPTRELAQQI+KV+ ALGD+L
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYL 136
Query: 437 NAKCHACIGGTNVREDIRQLESGV 508
K HAC+GGT+VRED R L SGV
Sbjct: 137 GVKVHACVGGTSVREDQRILASGV 160
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 129 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCSK 260
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I P K
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 77
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VVVGTPGRV+DM+ R++L + IK+FVLDEADEMLSR
Sbjct: 161 HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSR 198
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 122 bits (294), Expect = 2e-28
Identities = 59/84 (70%), Positives = 69/84 (82%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 436
+G DVI QAQSGTGKTATF ILQQ+D + ECQ+L+LAPTRELAQQI+KV+ ALGD+L
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYL 136
Query: 437 NAKCHACIGGTNVREDIRQLESGV 508
K HAC+GGT+VRED R L SGV
Sbjct: 137 GVKVHACVGGTSVREDQRILASGV 160
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +3
Query: 129 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCSK 260
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I P K
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 77
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VVVGTPGRV+DM+ R++L + IK+FVLDEADEMLSR
Sbjct: 161 HVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSR 198
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 120 bits (289), Expect = 9e-28
Identities = 53/86 (61%), Positives = 73/86 (84%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
++ GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V++A+GD
Sbjct: 65 IISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGD 124
Query: 431 HLNAKCHACIGGTNVREDIRQLESGV 508
++N + HACIGG ++ EDIR+LE GV
Sbjct: 125 YINIQVHACIGGKSIGEDIRKLEHGV 150
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +3
Query: 96 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXP 251
GP MD L + +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA+ P
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLP 64
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VV GTPGRV DMI RR L IKL +LDEADEML R
Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGR 188
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 119 bits (286), Expect = 2e-27
Identities = 53/86 (61%), Positives = 72/86 (83%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
++ GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V++A+GD
Sbjct: 65 IISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGD 124
Query: 431 HLNAKCHACIGGTNVREDIRQLESGV 508
+N + HACIGG ++ EDIR+LE GV
Sbjct: 125 FINIQVHACIGGKSIGEDIRKLEHGV 150
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +3
Query: 96 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXP 251
GP MD L + +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA+ P
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLP 64
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VV GTPGRV DMI RR L IKL +LDEADEML R
Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGR 188
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
L G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+ LG
Sbjct: 695 LCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQ 752
Query: 431 HLNAKCHACIGGTNVREDIRQLESGV 508
L+AK HA GGT+ ED + L +GV
Sbjct: 753 FLSAKAHAFCGGTSAHEDQQILSTGV 778
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
V VGTP V M+ RAL + I++FVLDEADE+L
Sbjct: 780 VAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL 814
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG +
Sbjct: 182 LTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKY 241
Query: 434 LNAKCHACIGGTNVREDIRQL 496
LN + GGT++++DI +L
Sbjct: 242 LNIQVMVSTGGTSLKDDIMRL 262
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESI 178
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+++VGTPGR+ D+ + + V+DEAD++L+
Sbjct: 267 HLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLA 303
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG H
Sbjct: 159 LTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKH 218
Query: 434 LNAKCHACIGGTNVREDIRQL 496
L + GGT++++DI +L
Sbjct: 219 LKIQVMVTTGGTSLKDDIVRL 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESI 155
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+++VGTPGR+ D+ + + V+DEAD++LS
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLS 280
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG H
Sbjct: 169 LTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKH 228
Query: 434 LNAKCHACIGGTNVREDIRQL 496
L + GGT++++DI +L
Sbjct: 229 LKIQVMVTTGGTSLKDDIIRL 249
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESI 165
Score = 34.7 bits (76), Expect = 0.060
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+++VGTPGR+ D+ + + ++DEAD++LS
Sbjct: 254 HLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLS 290
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 66.9 bits (156), Expect = 1e-11
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ-ALILAPTRELAQQIQKVVIALG 427
LQGRDVI Q+G+GKTA F++ I+Q + + R C A +LAPTRELA QI K ALG
Sbjct: 18 LQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIAKQFEALG 77
Query: 428 DHLNAKCHACIGG 466
++ +C IGG
Sbjct: 78 SAISLQCSVLIGG 90
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 615
+VVVGTPGR+ D +T + N +K VLDEAD++L
Sbjct: 105 HVVVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLL 141
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L+GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ + ALG
Sbjct: 112 LEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAP 171
Query: 434 LNAKCHACIGG 466
L +C A IGG
Sbjct: 172 LGLRCLAAIGG 182
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 508 YVVVGTPGRVYDMIT----RRALHANTIKLFVLDEADEML 615
+VVV TPGR+ +I + A T K VLDEAD +L
Sbjct: 197 HVVVATPGRIATLINDDPDLAKVFART-KFLVLDEADRVL 235
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 415
+QG+D++ +A++GTGKT F I IL I ++ + A++LAPTRELA+Q+++
Sbjct: 133 MQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER-- 190
Query: 416 IALGDHLNAKCHACIGGTNVREDIRQLESGV 508
D N + GGT + + IRQL GV
Sbjct: 191 -EFSDSSNVETICVYGGTPISQQIRQLNYGV 220
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
VV+GTPGRV D++ R AL+ + ++ VLDEAD+MLS
Sbjct: 222 VVIGTPGRVIDLLKRGALNLSEVRFVVLDEADQMLS 257
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 442
+D+IAQA +G+GKT F + +L ++D + + QA+ + PTRELAQQ + V++ +G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 443 KCHAC 457
C AC
Sbjct: 201 TC-AC 204
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
VV+GT G + I + + N IK+ V DEAD ML+
Sbjct: 226 VVIGTSGTLMKWINHKKILTNDIKILVFDEADHMLA 261
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 60 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 212
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 213 EKPSAIQ 233
+PS IQ
Sbjct: 122 SRPSKIQ 128
>03_05_0865 - 28365430-28367640
Length = 736
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQID-----TSIRECQ---ALILAPTRELAQQIQK 409
LQ RDVI A++G+GKTA F + +L I + E + A+++APTRELAQQI++
Sbjct: 350 LQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEE 409
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ +L K + +GG ++ E ++ G
Sbjct: 410 ETVKFATYLGIKVVSIVGGQSIEEQGFKIRQG 441
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C VV+ TPGR+ D + RR N VLDEAD M+
Sbjct: 442 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMI 478
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAL 424
L GRD+ A +G+GKTA FS+ +L+++ + + LIL PTRELA Q+ ++ L
Sbjct: 229 LTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKL 288
Query: 425 GDHLNAKCHACIGGTNVR 478
+ +C +GG + +
Sbjct: 289 AQFTDIRCCLIVGGLSTK 306
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRR-ALHANTIKLFVLDEADEML 615
+VV TPGR+ D + ++ + + +LDEAD +L
Sbjct: 318 IVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLL 353
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
+F ++NL LLR A G++KP+ IQ I
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACI 225
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIA 421
LQ RD++A A++G+GKT + I + + + L+LAPTRELA QIQ +
Sbjct: 639 LQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVK 698
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLESG 505
G C GGT+ +R+LE G
Sbjct: 699 FGRSSRVSCTCLYGGTSKGLQLRELERG 726
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+VV TPGR+ D++ R + + + VLDEAD ML
Sbjct: 729 IVVATPGRLNDILEMRKISLHQVSFLVLDEADRML 763
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALG 427
L+GRD+I Q+G+GKT F++ I+Q + + A +L+PTRELA QI + ALG
Sbjct: 76 LEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALG 135
Query: 428 DHLNAKCHACIGGTN 472
+ C +GG +
Sbjct: 136 SAIGLSCTVLVGGVD 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +1
Query: 508 YVVVGTPGRVYDMIT-RRALHANTIKLFVLDEADEMLS 618
++VVGTPGR+ D +T + N +K VLDEAD++L+
Sbjct: 163 HIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLN 200
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--ECQALILAPTRELAQQI-QKVVIA 421
+LQG DV+A+A++GTGKT F + ++ + T R L++ PTRELA Q+ +
Sbjct: 108 ILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQVAAEARKL 167
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLES 502
L H + IGGT + ++ R ++S
Sbjct: 168 LKYHRSLGVQVVIGGTKLPQEQRSMQS 194
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTI---KLFVLDEADEML 615
C ++V TPGR+ D + +N I K+ VLDEAD +L
Sbjct: 197 CQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLL 236
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-------LILAPTRELAQQIQK 409
LL GRD I A +G+GKT F + L + + E A L+L+PTRELAQQI
Sbjct: 126 LLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIAD 185
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
V+ G GGT+ I L+SGV
Sbjct: 186 VLCEAGAPCGISSVCLYGGTSKGPQISALKSGV 218
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+GTPGR+ D+I N + VLDEAD ML
Sbjct: 220 IVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRML 254
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI +L
Sbjct: 73 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLP 132
Query: 437 NAKCHACIGGTNVRE 481
K GG ++++
Sbjct: 133 EVKVAVFYGGVHIKK 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VVGTPGR+ + + L ++ F+LDE D+ML
Sbjct: 158 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKML 193
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI +L
Sbjct: 60 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLP 119
Query: 437 NAKCHACIGGTNVRE 481
K GG ++++
Sbjct: 120 EVKVAVFYGGVHIKK 134
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VVGTPGR+ + + L ++ F+LDE D+ML
Sbjct: 145 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKML 180
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIAL 424
+L G D+ A A++G+GKTA F + ++Q++ + +ALIL+PTR+LA Q K L
Sbjct: 60 ILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQL 119
Query: 425 GDHLNAKCHACIGGTNVREDIRQL 496
G + K +GG ++ +L
Sbjct: 120 GKFTDLKISLIVGGDSMESQFEEL 143
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 415
+QG+D+I +A++GTGKT F I I+ +I + S R A+ILAPTRELA+Q++K
Sbjct: 128 MQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK-E 186
Query: 416 IALGDHLNAKCHACIGGTNVREDIRQLESGV 508
L++ C GG + +R L GV
Sbjct: 187 FKESAPLDSLC--VYGGVPISHQMRALNYGV 215
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
VVVGTPGR+ D++ R L+ + I+ VLDEAD+ML+
Sbjct: 217 VVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLA 252
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRE---CQALILAPTRELAQQIQK 409
L GRD+IA+A++GTGKT F I +++Q+ S+R + L+LAPTRELA+Q++K
Sbjct: 165 LDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEK 224
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
+ L+ C GG + L GV
Sbjct: 225 EIKESAPKLSTVC--VYGGVSYNVQQNALSRGV 255
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
VVVGTPGR+ D+I +L +K VLDEAD+ML+
Sbjct: 257 VVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLA 292
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 412
LL G+D I AQ+G+GKT + +S+ ID QAL++ PTREL Q+ KV
Sbjct: 75 LLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKV 128
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +2
Query: 200 RLWF*KTFCNPATRNXALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----- 364
+L F K A ++ GRD I A++G+GKT F + +L+ +
Sbjct: 441 KLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIG 500
Query: 365 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
LI+APTREL QI + L C A GG+ V + I +L+ G
Sbjct: 501 LIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRG 547
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 418
L+GRD+I AQ+G+GKT ++ + L + R Q LILAPTRELA QIQ+
Sbjct: 191 LKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESG 250
Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
G + + GG IR L GV
Sbjct: 251 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGV 280
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+ TPGR+ DM+ + + VLDEAD ML
Sbjct: 282 IVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRML 316
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--------CQALILAPTRELAQQI-Q 406
L+G+DV+ +A++GTGK+A F + ++ + +++ +LIL PTRELA Q+
Sbjct: 377 LEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTA 436
Query: 407 KVVIALGDHLNAKCHACIGGTNVREDIRQLES 502
+ + L H + IGGT + D R+LES
Sbjct: 437 EANVLLKYHQGIGVQSLIGGTRFKLDQRRLES 468
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRR---ALHANTIKLFVLDEADEML 615
C ++V TPGR+ D I + ++ +KL VLDEAD +L
Sbjct: 471 CQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLL 510
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-----CQALILAPTRELAQQIQ 406
+LQG+DV+A+A++GTGKT F +I +L + S R+ L++ PTRELA Q+
Sbjct: 40 ILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVA 99
Query: 407 -KVVIALGDHLNAKCHACIGGTNVREDIRQLES 502
+ L H + IGGT + ++ R +++
Sbjct: 100 VEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQA 132
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRR---ALHANTIKLFVLDEADEML 615
++V TPGR+ D + + +K+ VLDEAD +L
Sbjct: 145 ILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLL 182
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVV 415
++ GRD I A++G+GKT F + +L+ + LI+APTREL QI +
Sbjct: 319 IMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDI 378
Query: 416 IALGDHLNAKCHACIGGTNVREDIRQLESG 505
L C A GG+ V + I +L+ G
Sbjct: 379 KKFAKSLGINCVAIYGGSGVAQQISELKRG 408
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 400
+ GRD++A AQ+G+GKTA F I+ I +S R Q ALIL+PTREL+ Q
Sbjct: 272 IAGRDLMACAQTGSGKTAAFCFPIISGIMSS-RPPQRPRGSRTAYPLALILSPTRELSVQ 330
Query: 401 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
I + + GG + + +R+LE GV
Sbjct: 331 IHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGV 366
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V TPGR+ D++ R + +K LDEAD ML
Sbjct: 368 ILVATPGRLMDLLERARVSLQMVKYLALDEADRML 402
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 50.8 bits (116), Expect = 9e-07
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 403
+ GRD++A AQ+G+GKTA F I+ I S + ALIL+PTREL+ QI
Sbjct: 358 IAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQI 417
Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
+ K GG + + +R+LE GV
Sbjct: 418 HEEARKFAYQTGVKVVVAYGGAPITQQLRELERGV 452
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V TPGR+ D++ R + IK LDEAD ML
Sbjct: 454 ILVATPGRLMDLLERARVSLQMIKYLALDEADRML 488
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 439
RD+ + +G+GKT +++ I+Q + T +R +AL++ PTR+LA Q+++V A+ +
Sbjct: 75 RDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVG 134
Query: 440 AKCHACIGGTNVREDIRQL 496
+ +G +++ +++ L
Sbjct: 135 LSVGSAVGQSSIADEVSNL 153
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Frame = +2
Query: 263 RDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQ------ALILAPTRELAQQIQKVVIA 421
R ++ A +G+GKTA+F + I+ E C A++LAPTREL Q+++
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKV 279
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLESGV 508
LG L K +GG + + I ++E+G+
Sbjct: 280 LGKGLPFKTALVVGGDPLAQQIYRIENGI 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
++VGTPGR+ D++ + + N + +FVLDE D +L R
Sbjct: 310 LIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLER 346
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTS----------IRE-CQ-ALILAPTRELAQ 397
L GRD++A AQ+G+GKTA F I+ I +R C ALIL+PTREL+
Sbjct: 190 LAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSM 249
Query: 398 QIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
QI + + GG + + +R LE GV
Sbjct: 250 QIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGV 286
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V TPGR+ D++ R + +I+ LDEAD ML
Sbjct: 288 ILVATPGRLVDLLERARVSLQSIRYLALDEADRML 322
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVI 418
L+ G DV+A A++G+GKT F +I +L ++ S R ++L PTRELA Q V
Sbjct: 120 LMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAK 179
Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
L + + IGG ++R + QL G+
Sbjct: 180 ELMRYHSQTLGYVIGGIDLRGEAEQLAKGI 209
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ----ALILAPTRELAQQIQKVV 415
+L GRD+I A++G+GKTA F + ++ I D E + ++ APTRELA QI
Sbjct: 253 VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEA 312
Query: 416 IALGDHLNAKCHACIGGTNVREDIRQLESG 505
N + A GG + + ++L++G
Sbjct: 313 KKFAKPYNLRVAAVYGGVSKFDQFKELKAG 342
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 612
C +V+ TPGR+ D++ +AL VLDEAD M
Sbjct: 343 CEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRM 378
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 132 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
D + +++F D +L+ I G+EKP+ IQ +A+
Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQAL 250
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIA 421
L+ RD++A A++G+GKT + I +L+++ + R+ L+L+PTRELA QIQ
Sbjct: 215 LRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKK 274
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLESG 505
G GG +R LE G
Sbjct: 275 FGRSSRISSVCLYGGAPKGPQLRDLERG 302
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+VV TPGR+ D++ R + + + VLDEAD ML
Sbjct: 305 IVVATPGRLNDILEMRRVSLHQVSYLVLDEADRML 339
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+VVGTPGRV D + + L+ ++K VLDEADEML+
Sbjct: 235 IVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLN 270
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Frame = +2
Query: 233 ATRNXALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPT 382
AT +L G D++ +A++G GKT F + IL+ + + L+L PT
Sbjct: 132 ATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPT 191
Query: 383 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
RELA+Q+ G GG++ R + GV
Sbjct: 192 RELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGV 233
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQ 400
LL GR+ A A +G+GKT F IL +I +E +A+IL PTRELA Q
Sbjct: 180 LLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQ 230
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 612
C +++ TP R+ + +R L + ++ VLDE+D++
Sbjct: 264 CDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKL 299
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 44.4 bits (100), Expect = 7e-05
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKVVI 418
LL G+DV+ A++G+GKT F I ++ + + +++ PTRELA Q V
Sbjct: 130 LLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQTHNVAK 189
Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
L + + IGG R + QL GV
Sbjct: 190 ELMKYHSQTLGYIIGGNGRRGEADQLAKGV 219
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIREC--QALILAPTRELAQQIQK 409
+L+G+DV+A+A++G+GKT + + +L ++ + IR+ IL PTREL QQ+
Sbjct: 117 ILEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELCQQVHN 176
Query: 410 VVIALGDHLNAKCHAC-IGGTNVREDIRQLESG 505
+L + +K + + +DI+ SG
Sbjct: 177 EASSLLEFCTSKLKVVQVNASMSDKDIKVALSG 209
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIA 421
LQ +DV+A A++G+GKT + + ++++ + R L+LAPTRELA QI + +
Sbjct: 185 LQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVK 244
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLESGV 508
G GG +R L+ GV
Sbjct: 245 FGRSSRISSTCLYGGAPKGPQLRDLDRGV 273
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
VVV TPGR+ D++ R + + VLDEAD ML
Sbjct: 275 VVVATPGRLNDILEMRRISLKQVSYLVLDEADRML 309
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI------------------DTSIRE--CQALILA 376
QG+DVI A++G+GKT F + ILQ++ D + RE +ALIL
Sbjct: 179 QGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILT 238
Query: 377 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE 499
PTRELA+Q+ + L + +GG ++ + R L+
Sbjct: 239 PTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLK 279
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHA---NTIKLFVLDEADEMLSR 621
+VVGTPGR++++++ H +++ FVLDEAD M+ R
Sbjct: 284 IVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIER 323
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Frame = +2
Query: 224 CNP--ATRNXALLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 382
C P A LL +DV A +G+GKT F + +++ + E +I++PT
Sbjct: 46 CTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPT 105
Query: 383 RELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 499
REL+ QI V L +GG +++ ++++LE
Sbjct: 106 RELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLE 145
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 499 EWCYVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 615
E ++VGTPG+++D++ R L+ +++ +LDEAD +L
Sbjct: 147 EGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLL 186
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V TPGR+ DM+ R + IK V+DEAD ML
Sbjct: 246 ILVATPGRLVDMVERSKVSLEAIKYLVMDEADRML 280
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 16/65 (24%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISIL----------------QQIDTSIRECQALILAPTR 385
L GRD++A AQ+G+GKTA F + ++ + + + +AL+LAPTR
Sbjct: 119 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 178
Query: 386 ELAQQ 400
ELA Q
Sbjct: 179 ELAAQ 183
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+VVGTPGR+ ++ LH ++ + VLDE D++LS
Sbjct: 727 IVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLS 762
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPTRELAQQI 403
Q D + Q+ +G+GKT + + IL +I D+S + +A+I+AP+REL QI
Sbjct: 629 QKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQI 688
Query: 404 -QKVVIALGDHLNAKCHACIGGTN 472
++V LG + +GG N
Sbjct: 689 VREVEKILGPNDKRLVQQLVGGAN 712
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 418
L+GRD+I A++G+GKT + + + ++ L+LAPTRELA QIQ+
Sbjct: 126 LRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAT 185
Query: 419 ALG 427
G
Sbjct: 186 KFG 188
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+ TPGR+ DMI + + VLDEAD ML
Sbjct: 191 IVIATPGRLIDMIESHHTNLRRVTYLVLDEADRML 225
>03_02_0189 - 6253659-6255380
Length = 573
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+VVGTPGR+ ++ LH + + VLDE D++LS
Sbjct: 265 IVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLS 300
Score = 35.5 bits (78), Expect = 0.034
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPTRELAQQI 403
Q D + Q+ +G+GKT + + IL +I D S + +A+I+AP+REL QI
Sbjct: 167 QKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQI 226
Query: 404 -QKVVIALGDHLNAKCHACIGGTN 472
++V LG + +GG N
Sbjct: 227 VREVEKILGPNDKRLVQQLVGGAN 250
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATF------SISILQQIDTSIRE--CQALILAPTRELAQQ-IQKV 412
G+DV+A+A++GTGKT F +S L ID + +++ PTRELA Q +
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQAAAEA 551
Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLES 502
L H + IGGT + + +++ +
Sbjct: 552 NKLLKFHPSIGVQLVIGGTRMALEQKRMHT 581
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRR---ALHANTIKLFVLDEADEML 615
C ++V TPGR+ D + A +K+ +LDEAD +L
Sbjct: 584 CQILVATPGRLKDHMENTPGFATRLMGVKVLILDEADRLL 623
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 409
L GRD+I A +G+GKT F + ++ ++I I + LI+ P+RELA+Q +
Sbjct: 208 LSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHE 267
Query: 410 VV-IALGDHLNA-----KCHACIGGTNVREDIRQLESGV 508
V+ + L + A + CIGG ++R + ++ GV
Sbjct: 268 VIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGV 306
Score = 36.3 bits (80), Expect = 0.020
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VV TPGR+ D+++++ ++ + + LDEAD ++
Sbjct: 307 HIVVATPGRLKDLLSKKKMNLDNCRYLTLDEADRLV 342
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VVGTPGR+ D I + IK VLDEAD M +
Sbjct: 261 MVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQ 297
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 350 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 478
R +A++L PTREL +Q+ +V ++ H + GG+ +R
Sbjct: 207 RRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIR 249
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 35.5 bits (78), Expect = 0.034
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFS---ISILQQIDTSIRECQ---ALILAPTRELAQQIQKVV 415
+ G+ ++ +A +GTGKT + + +LQ + + AL+L PTREL Q+ +
Sbjct: 59 MSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIA 118
Query: 416 IALGDHLNAKCHACI-GGTNVREDIRQLESGV 508
L + I GG N ++ +L G+
Sbjct: 119 QQLVHRFHWLVPGYIMGGENRAKEKARLRKGI 150
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 35.1 bits (77), Expect = 0.045
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF-----SISILQQIDTSIRECQ---ALILAPTRELAQQ-- 400
+L GRD+I A +G+GKT F +++ +++ I + +I+ P+RELA+Q
Sbjct: 216 VLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTY 275
Query: 401 --IQKVVIALGD--HLNAKCHACIGGTNVREDIRQLESGVM 511
I++ ++ L + + + CIGG ++R + ++ G++
Sbjct: 276 DVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGLI 316
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQI 403
+L+G+ I QSG+GKT + ++Q + +S R + ++L PT ELA Q+
Sbjct: 274 VLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 153 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXP 251
+F ++ +E+L + ++GF +PS IQ A P
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRP 273
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEAD 606
V++ TPGR ++ + N ++ VLDE D
Sbjct: 405 VLIATPGRFLYLLQEGFVQLNNLRCVVLDEVD 436
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDT 343
L GRDV+ A++G+GKT F I +L T
Sbjct: 115 LCGRDVLGAAKTGSGKTLAFVIPVLMSAAT 144
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 48 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 143
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 13 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 186
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
>04_03_0653 - 18429736-18431379
Length = 547
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 323 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI--GGTNVREDIRQL 496
IL ++DT A + LA++I +V ++ D L + HAC+ G D R+L
Sbjct: 47 ILGRLDTRTALAAAALSRRLDRLAREIPALVFSVRDVLPPRYHACVRAHGDAAGADARKL 106
Query: 497 ESGV 508
++ +
Sbjct: 107 DAAI 110
>11_07_0014 +
27379941-27379974,27381975-27382033,27382561-27382782,
27383727-27383810,27385054-27385131,27385716-27385832,
27385956-27386019,27386399-27386402,27386565-27386613,
27388973-27389440
Length = 392
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 504 PLSSWRISSRTLVPPMQAWHLAFK*SPRA 418
P S+R+S+ + VPP W L +P+A
Sbjct: 214 PSLSYRVSANSTVPPTLTWELQSTATPKA 242
>09_02_0267 -
6485428-6485895,6488255-6488303,6488466-6488469,
6488849-6488912,6489036-6489152,6489737-6489814,
6491058-6491141,6492086-6492307,6492835-6492893,
6494894-6494927
Length = 392
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 504 PLSSWRISSRTLVPPMQAWHLAFK*SPRA 418
P S+R+S+ + VPP W L +P+A
Sbjct: 214 PSLSYRVSANSTVPPTLTWELQSTATPKA 242
>08_02_1433 - 27063626-27064135
Length = 169
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 450 MLALVAPMSVKIFANWRVVLCGGGHSRSCI*YD 548
M +L AP + WRV GGG R C+ YD
Sbjct: 1 MASLYAPRLTR----WRVATSGGGVVRDCVEYD 29
>08_01_0663 +
5721902-5723176,5724162-5724233,5724405-5724560,
5724655-5724844,5725173-5725255
Length = 591
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 568 HEAHDELSYHIHDLECPPPHNTTLQLANIFT 476
+E D H HD EC ++ T +LAN F+
Sbjct: 373 NECRDGKYSHCHDSECCSSYHDTCKLANSFS 403
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,241,742
Number of Sequences: 37544
Number of extensions: 438229
Number of successful extensions: 1535
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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