Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0690
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 140 6e-34
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 140 6e-34
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 118 3e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 118 3e-27
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 79 3e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 71 9e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 8e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 8e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 57 9e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 56 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 54 8e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 54 1e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 53 1e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 49 2e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 48 5e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 9e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 3e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 3e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 7e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 4e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 4e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 4e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 6e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 40 0.001
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 40 0.001
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 40 0.001
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 40 0.002
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.002
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.002
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.003
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 37 0.010
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 37 0.013
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.071
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.16
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 33 0.22
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.50
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 1.5
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 2.7
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 29 2.7
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 3.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.5
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 4.7
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 28 4.7
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 8.2
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 8.2
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 8.2
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 27 8.2
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 27 8.2
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 8.2
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 140 bits (340), Expect = 6e-34
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 427
A+L+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 428 DHLNAKCHACIGGTNVREDIRQLESG 505
D++N +CHACIGGTN+ EDIR+L+ G
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYG 144
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VV GTPGRV+DMI RR L IKL VLDEADEML++
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNK 183
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 140 bits (340), Expect = 6e-34
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 427
A+L+ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 428 DHLNAKCHACIGGTNVREDIRQLESG 505
D++N +CHACIGGTN+ EDIR+L+ G
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYG 144
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +3
Query: 144 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VV GTPGRV+DMI RR L IKL VLDEADEML++
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNK 183
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 118 bits (285), Expect = 3e-27
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 439
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 440 AKCHACIGGTNVREDIRQLESGV 508
CIGGT+VR+D R+LE+G+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGI 148
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +3
Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCS 257
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI PC+
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCT 64
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VVVGTPGRV DMI R AL + IK+FVLDEADEMLSR
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSR 186
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 118 bits (285), Expect = 3e-27
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 439
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 440 AKCHACIGGTNVREDIRQLESGV 508
CIGGT+VR+D R+LE+G+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGI 148
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +3
Query: 117 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIXPCS 257
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI PC+
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCT 64
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+VVVGTPGRV DMI R AL + IK+FVLDEADEMLSR
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSR 186
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 78.6 bits (185), Expect = 3e-15
Identities = 32/85 (37%), Positives = 57/85 (67%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H
Sbjct: 78 LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 434 LNAKCHACIGGTNVREDIRQLESGV 508
+ K GGT++R+DI +L V
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRLNGTV 162
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
++V+ TPGR+ D++ + K VLDEAD++LS+
Sbjct: 163 HLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQ 200
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 156 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
+L+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182
Query: 431 HLNAKCHACIGGTNVREDIRQL 496
+ KC +GG ++ R+L
Sbjct: 183 PITLKCSVIVGGRSLIHQAREL 204
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEML 615
+VVV TPGR+ D+I A I+ FVLDEAD ML
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRML 248
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 430
+L+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGK 182
Query: 431 HLNAKCHACIGGTNVREDIRQL 496
+ KC +GG ++ R+L
Sbjct: 183 PITLKCSVIVGGRSLIHQAREL 204
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEML 615
+VVV TPGR+ D+I A I+ FVLDEAD ML
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRML 248
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 442
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 443 KCHACIGGTNV 475
K H I G N+
Sbjct: 310 KIHYAIKGGNM 320
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 511 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 615
+V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 332 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 442
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 443 KCHACIGGTNV 475
K H I G N+
Sbjct: 335 KIHYAIKGGNM 345
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 511 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 615
+V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 357 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 442
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 443 KCHACIGGTNV 475
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
Score = 31.1 bits (67), Expect = 0.66
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 511 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 615
+V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 741 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALG 427
++ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 58 IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 428 DHLNAKCHACIGGTNVRE 481
+C +GG + E
Sbjct: 118 RFTGLRCACLVGGDQIEE 135
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 451 CLHWWHQCP*RYSPTGEWCYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 612
CL Q ++S E +++ TPGR+ +I L + ++ V DEAD +
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRL 179
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALG 427
++ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 58 IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 428 DHLNAKCHACIGGTNVRE 481
+C +GG + E
Sbjct: 118 RFTGLRCACLVGGDQIEE 135
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 451 CLHWWHQCP*RYSPTGEWCYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 612
CL Q ++S E +++ TPGR+ +I L + ++ V DEAD +
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRL 179
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
LQG+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 79 LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138
Query: 434 LNAKCHACIGGTNV 475
+ +GG ++
Sbjct: 139 IGLIAAVIVGGVDM 152
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 508 YVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLS 618
+++V TPGR+ D + + + +K ++DEAD +L+
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILN 201
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 165 MNLKEELLRGIYAYGFEKPSAIQQRAIXPCSKDAMLSLKPSQELEKLLLSL 317
M LKEELLRGIY +GFEKPSAIQ+ A+ PC+ ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 439
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 440 AKCHACIGGTNVRED 484
C+G E+
Sbjct: 93 VNA-TCLGFDTTAEN 106
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR 621
+V++GTP D ++ + IK+FVLDEADEMLS+
Sbjct: 111 HVLMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSK 145
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 418
+ GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
L K GG + R LE GV
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLERGV 253
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+VV TPGR+ D + + VLDEAD ML
Sbjct: 255 IVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRML 289
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 403
LQ RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394
Query: 404 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 508
++ G L K + IGG + + +L GV
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGV 429
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
VV+ TPGR+ D++ R L N +LDEAD ML
Sbjct: 431 VVIATPGRLLDVLENRYLLLNQCTYVILDEADRML 465
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 57 LLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP- 115
Query: 434 LNAKCHACIGGT 469
A+ +GG+
Sbjct: 116 TGARTSVYVGGS 127
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 433
L GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 57 LLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP- 115
Query: 434 LNAKCHACIGGT 469
A+ +GG+
Sbjct: 116 TGARTSVYVGGS 127
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 54.0 bits (124), Expect = 8e-08
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIAL 424
L G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL 242
Query: 425 GDHLNAKCHACIGGTNVREDIRQLESG 505
+ + C GG +++ L SG
Sbjct: 243 STFIQLEVCLCAGGLDLKAQEAALRSG 269
Score = 30.7 bits (66), Expect = 0.88
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 51 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 224
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 225 AIQQRAI 245
IQQ I
Sbjct: 173 PIQQACI 179
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 437 NAKCHACIGGTNVREDIRQL 496
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 437 NAKCHACIGGTNVREDIRQL 496
K GG +++D +L
Sbjct: 138 GVKVAVFFGGMAIKKDEERL 157
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 436
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 437 NAKCHACIGGTNVREDIRQL 496
K GG +++D +L
Sbjct: 137 GVKVAVFFGGMAIKKDEERL 156
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 412
+++ GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLESG 505
L K GG + E I L+ G
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRG 427
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIA 421
LL DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+
Sbjct: 43 LLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQP 102
Query: 422 LGDHLNAKCHACIGGTNVREDIRQLES 502
+ LN GG V ++I+ ++
Sbjct: 103 FAEKLNLTVETVTGGQKVDKNIKMFKN 129
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 421
L G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170
Query: 422 LGDHLNAKCHACIGGTNV 475
+G H C IGG++V
Sbjct: 171 VGAHHGFSCGLVIGGSDV 188
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEML 615
++V TPGR+ + A + +++++ VLDEAD ML
Sbjct: 200 IIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRML 235
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVI 418
LL+G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLS 161
Query: 419 ALGDHLNAKCHACIGGTNVREDIRQLESGV 508
L + N +GG+N + +L GV
Sbjct: 162 ELLEGSNLTYGLVMGGSNRSAEKDKLAKGV 191
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 9e-06
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 409
L GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284
Query: 410 VVIALGDHL------NAKCHACIGGTNVREDIRQLESGV 508
++I + D L + CIGG + E + + G+
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VV TPGR+ DM+T++ ++ + VLDEAD ML
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRML 359
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
LL RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTR
Sbjct: 173 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 232
Query: 386 ELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 505
ELA QI K N + GG N R+ + +L +G
Sbjct: 233 ELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 273
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 275 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 310
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
LL RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTR
Sbjct: 157 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 216
Query: 386 ELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 505
ELA QI K N + GG N R+ + +L +G
Sbjct: 217 ELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 257
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 259 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 294
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.6 bits (103), Expect = 3e-05
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTR 385
LL RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTR
Sbjct: 154 LLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTR 213
Query: 386 ELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 505
ELA QI K N + GG N R+ + +L +G
Sbjct: 214 ELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 254
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 256 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 291
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 10/65 (15%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQ 400
+L G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA Q
Sbjct: 415 VLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQ 474
Query: 401 IQKVV 415
I + +
Sbjct: 475 IHEAL 479
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C +++GT GR+ D + + ++ V DEAD +L
Sbjct: 510 CDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLL 546
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQ 397
LL G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177
Query: 398 QIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 508
QI+ V N C+ GG + E + GV
Sbjct: 178 QIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV 213
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
+V+ TPGR+ D+ + ++ VLDEAD ML
Sbjct: 215 IVIATPGRLTDLSNDGVISLASVTYVVLDEADRML 249
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 394
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81
Query: 395 QQIQKVVIALGDHLNAKCHACIGG 466
QI K + AL + +GG
Sbjct: 82 IQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELA 394
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248
Query: 395 QQIQKVVIALGDHLNAKCHACIGG 466
QI K + AL + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 412
L+ ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182
Query: 413 VIALGDHL 436
+ L L
Sbjct: 183 FVKLSQAL 190
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+VVV TPG++ M + R + + V+DEAD +LS
Sbjct: 215 HVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLS 251
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 245
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQ 400
++ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
Query: 401 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 502
L KC GG + +++ L S
Sbjct: 830 TFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V T GR+ D + + + +K VLDEAD M+
Sbjct: 869 ILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQ 400
++ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
Query: 401 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 502
L KC GG + +++ L S
Sbjct: 830 TFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++V T GR+ D + + + +K VLDEAD M+
Sbjct: 869 ILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 412
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C ++VGT GRV A+ + + VLDEAD M+
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMI 462
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +2
Query: 260 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 412
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 413 VIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C ++VGT GRV A+ + + VLDEAD M+
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMI 462
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 403
L GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 499 EWCYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 612
E +VV TPGR+ D++ A + V DEAD M
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRM 425
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +2
Query: 257 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 409
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 410 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 505
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 511 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
++VGT GR+ + + + FVLDEAD M+
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
C +VVGTP RV+D+I L ++ V+DE D+ L+
Sbjct: 335 CDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLA 372
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSISILQ 331
A+L G D + A++G+GKT FS+ I Q
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQ 62
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 239 RNXALLQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVV 415
R+ L+ RDV A +G+GKT + + +L + + + QA+IL P + L QI
Sbjct: 149 RSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEF 208
Query: 416 IALGDHLN-AKCHACIGGTNVREDIRQLES 502
D AK + G + ++ RQL S
Sbjct: 209 KRWNDESGVAKVVSLSGANDFEKEARQLAS 238
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 505 CYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
C++++ TPGR+ D++ + + + VLDEAD ML
Sbjct: 302 CHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
Score = 35.1 bits (77), Expect = 0.041
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 16/68 (23%)
Frame = +2
Query: 248 ALLQGRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAP 379
AL GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+P
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSP 258
Query: 380 TRELAQQI 403
TREL+ QI
Sbjct: 259 TRELSLQI 266
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Frame = +2
Query: 251 LLQGRDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 400
+ + R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 160 MTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 248 ALLQGRDVIA-QAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 424
AL + R ++ Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ +
Sbjct: 77 ALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKT 133
Query: 425 GDHLNAKCHA-CIGGTNVREDI 487
+ K H + TN D+
Sbjct: 134 LKRMGIKVHEHALMDTNEYRDV 155
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 508 YVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 618
+VVV TPG++ M + R + + V+DEAD +LS
Sbjct: 148 HVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLS 184
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 111 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 13
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 266 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 403
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 484 YSPTGEWCYVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 615
Y T + C + T G++ I + + + +K+ +LDE+D+M+
Sbjct: 216 YQFTKDQCDIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMI 259
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 585 KFDGVGMKRTT--SYHIIYTTWSAHHHITPLSSWRI 484
K GV R T S H++ W AH H++ + +W I
Sbjct: 672 KLCGVSADRLTEISQHLLICCWRAHKHVSGIFAWII 707
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 269 VIAQAQSGTGKTATFSISILQQIDTSIREC 358
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 81 DPSMAHFWNPLANLLTFFQTNKT 13
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 550 LSYHIHDLECPPPHNTTLQLANIFT 476
L YH H + PPP TT Q A F+
Sbjct: 884 LMYHHHQMSAPPPPTTTPQQAPQFS 908
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 232 SNAQXCLAPRTRCYRSSPVRNWKNCYFLYIDSTTNRYKHS*MSSFD 369
+N Q + PRT +R++ +RN + Y+D ++ YK M+S+D
Sbjct: 322 NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSSADYK---MASWD 364
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 24 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 164
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 380 WEPGSKLDIHECLYRFVVESI*RK 309
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 323 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 445
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 323 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 445
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 424
LQG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 425 GDHL 436
DH+
Sbjct: 365 LDHV 368
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 254 LQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 424
LQG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 425 GDHL 436
DH+
Sbjct: 365 LDHV 368
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 323 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 445
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,944,390
Number of Sequences: 27780
Number of extensions: 362272
Number of successful extensions: 1235
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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