Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0689
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.0  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.6  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.6  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.6  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   6.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = +1

Query: 322 KKKSLCLESIKKVHCRLICLDKLTVYTTVRFSHSTLC 432
           +K  LC   ++K H    C          R  HS LC
Sbjct: 372 RKHGLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLC 408


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -3

Query: 468 MYT*I--RIRQGYNAQSTMRESYSSVHCQF 385
           MYT +  +I  GYN Q       S  HC F
Sbjct: 570 MYTDLYKKIMLGYNGQEKFALDMSEAHCGF 599


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -3

Query: 468 MYT*I--RIRQGYNAQSTMRESYSSVHCQF 385
           MYT +  +I  GYN Q       S  HC F
Sbjct: 570 MYTDLYKKIMLGYNGQEKFALDMSEAHCGF 599


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -3

Query: 468 MYT*I--RIRQGYNAQSTMRESYSSVHCQF 385
           MYT +  +I  GYN Q       S  HC F
Sbjct: 570 MYTDLYKKIMLGYNGQEKFALDMSEAHCGF 599


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -3

Query: 468 MYT*I--RIRQGYNAQSTMRESYSSVHCQF 385
           MYT +  +I  GYN Q       S  HC F
Sbjct: 570 MYTDLYKKIMLGYNGQEKFALDMSEAHCGF 599


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,128
Number of Sequences: 2352
Number of extensions: 14172
Number of successful extensions: 60
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)