Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0688
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 112 6e-24
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 104 2e-21
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 101 9e-21
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 101 1e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 99 3e-20
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 100 5e-20
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 99 8e-20
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 93 5e-18
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 86 6e-16
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 85 8e-16
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 84 2e-15
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 84 2e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 3e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 81 1e-14
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 80 3e-14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 80 3e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 79 7e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 77 2e-13
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 76 6e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 75 8e-13
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 75 8e-13
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 68 1e-10
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 67 2e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 66 4e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 66 4e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 7e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 66 7e-10
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 65 9e-10
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 65 1e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 2e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 64 2e-09
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 63 5e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 63 5e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 62 8e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 62 1e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 61 1e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 61 1e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 61 1e-08
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 60 3e-08
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 60 3e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 60 3e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 60 4e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 50 6e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 59 8e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 59 8e-08
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 59 8e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 58 1e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 58 1e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 57 2e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 57 3e-07
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 57 3e-07
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 56 4e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 4e-07
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 56 6e-07
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 55 1e-06
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 55 1e-06
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 55 1e-06
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 55 1e-06
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 54 2e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 54 3e-06
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 53 4e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 52 7e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 7e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 52 9e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 52 1e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 1e-05
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 52 1e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 52 1e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 51 2e-05
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 51 2e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 6e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 48 1e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 48 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 1e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 48 2e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 47 3e-04
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 47 3e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 46 6e-04
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 46 6e-04
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 44 0.002
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 44 0.002
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 44 0.002
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 43 0.004
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.013
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 41 0.022
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 40 0.029
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 40 0.029
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 40 0.051
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.051
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.090
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 38 0.12
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 38 0.16
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 38 0.16
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.21
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 37 0.36
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.36
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.48
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 0.63
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.63
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 35 1.1
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 35 1.5
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 35 1.5
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.5
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 1.9
UniRef50_A2ECM7 Cluster: Cell cycle control protein, putative; n... 34 2.6
UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA - Su... 34 2.6
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 33 3.4
UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE P... 33 4.5
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 33 4.5
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 4.5
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 5.9
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 5.9
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 32 7.8
UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY0608... 32 7.8
UniRef50_A0CBW4 Cluster: Chromosome undetermined scaffold_165, w... 32 7.8
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 112 bits (269), Expect = 6e-24
Identities = 56/89 (62%), Positives = 63/89 (70%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G VFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS +
Sbjct: 253 WTLGF--VFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWF 310
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 270
PLFTG++LN++ LKIQF +FIGV FF
Sbjct: 311 PLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 104 bits (249), Expect = 2e-21
Identities = 53/93 (56%), Positives = 61/93 (65%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 340 WALGF--IFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWF 397
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
PLFTG +LNS KI F +FIGV FF F
Sbjct: 398 PLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHF 430
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 6/43 (13%)
Frame = +3
Query: 216 YTKNSIFYNIYWS------NITFFPQHFLGLAGIPRRYSDYPD 326
YT NS++ I++ N+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 403 YTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 101 bits (243), Expect = 9e-21
Identities = 50/93 (53%), Positives = 59/93 (63%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS +
Sbjct: 324 WTMGF--IFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWF 381
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
P+F GL +N Y LKI F+ FIGV FF F
Sbjct: 382 PMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHF 414
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/84 (38%), Positives = 39/84 (46%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRI 434
N+ FFPQHFLGL+G+PRRYSDYPD QR
Sbjct: 406 NLIFFPQHFLGLSGMPRRYSDYPDMYLNWNLFSSFGSLISLIGVFLFIFIIWESLIMQRF 465
Query: 435 NLFSLNLPSSIE*YQNLPPAEHSY 506
+F + SSIE + PP +HSY
Sbjct: 466 VIFVKFINSSIEWFHLYPPLDHSY 489
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 101 bits (241), Expect = 1e-20
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS + +
Sbjct: 340 WALGF--IFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWF 397
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
PLFTG +L+ KI F +FIGV FF F
Sbjct: 398 PLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHF 430
Score = 56.4 bits (130), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 422 NLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 99 bits (238), Expect = 3e-20
Identities = 51/93 (54%), Positives = 59/93 (63%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 341 WALGF--IFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWF 398
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
PLFTG +LNS K F +F GV FF F
Sbjct: 399 PLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHF 431
Score = 56.4 bits (130), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 423 NLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 99.5 bits (237), Expect = 5e-20
Identities = 50/93 (53%), Positives = 60/93 (64%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 340 WALGF--IFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWF 397
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
PLF+G +L+ KI F +FIGV FF F
Sbjct: 398 PLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHF 430
Score = 55.2 bits (127), Expect = 1e-06
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 422 NLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 98.7 bits (235), Expect = 8e-20
Identities = 50/93 (53%), Positives = 59/93 (63%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 341 WALGF--IFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWF 398
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
PLFTG +LN+ K F +F GV FF F
Sbjct: 399 PLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHF 431
Score = 56.4 bits (130), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 423 NLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 92.7 bits (220), Expect = 5e-18
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 105 WALGF--IFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWF 162
Query: 184 PLFTGLSLNSYILKIQFFTIFI 249
PLF+G +L++ KI F +F+
Sbjct: 163 PLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 85.8 bits (203), Expect = 6e-16
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G VFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +
Sbjct: 317 WALGF--VFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWF 374
Query: 184 PLFTGLSLN 210
PLF+G +L+
Sbjct: 375 PLFSGYNLH 383
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 85.4 bits (202), Expect = 8e-16
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + TGL
Sbjct: 352 IFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQ 411
Query: 205 LNSYILKIQFFTIFIGV 255
+ +I F++ FIGV
Sbjct: 412 YPETLGQIHFWSTFIGV 428
Score = 46.8 bits (106), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TF P HFLGLAG+PRR DYPD
Sbjct: 429 NLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/89 (48%), Positives = 51/89 (57%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L VF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS P
Sbjct: 342 LGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIL 401
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
GL N K F+ +F GV FF F
Sbjct: 402 GLDYNLLYSKAHFWVLFTGVNLTFFPQHF 430
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 213 LYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPD 326
LY+K + N+TFFPQHFLGL G+PRR SDYPD
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 83.8 bits (198), Expect = 2e-15
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS +
Sbjct: 382 WALGF--IFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWF 439
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 270
P +G N ++ ++ F+ F GV FF
Sbjct: 440 PKMSGKMYNEFLGQLHFWVFFAGVNLLFF 468
Score = 47.2 bits (107), Expect = 3e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+ FFP HFLGL+G+PRRY DYP+
Sbjct: 464 NLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.4 bits (197), Expect = 3e-15
Identities = 43/93 (46%), Positives = 54/93 (58%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS +
Sbjct: 307 WALGF--IFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWF 364
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
TG + I F+ +F+GV FF F
Sbjct: 365 GKITGYAYKDIYGLIHFWLMFLGVNITFFPQHF 397
Score = 56.4 bits (130), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
NITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 389 NITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 81.4 bits (192), Expect = 1e-14
Identities = 43/89 (48%), Positives = 53/89 (59%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L V +FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P
Sbjct: 368 LGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKII 427
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
GLS ++ KI F+ +FIGV FF F
Sbjct: 428 GLSYDTKASKIHFWILFIGVNLTFFPQHF 456
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGL G+PRR SDYPD
Sbjct: 448 NLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
W G VFLFTVGGLTGV+LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 44 WALGF--VFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLS 86
Score = 36.3 bits (80), Expect = 0.48
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3
Query: 153 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLA 293
C Y IY L+ FI K L KNSIF NI+ FP FL ++
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSIS 138
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 80.2 bits (189), Expect = 3e-14
Identities = 42/89 (47%), Positives = 52/89 (58%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G VV LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +
Sbjct: 346 WAIG--VVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWF 403
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 270
P +TG+ ++ F FIGV FF
Sbjct: 404 PFWTGMVPRKDLVLTHFMLTFIGVNFTFF 432
Score = 47.6 bits (108), Expect = 2e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N TFFP H++GL G+PRRY DYPD
Sbjct: 428 NFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 79.0 bits (186), Expect = 7e-14
Identities = 39/89 (43%), Positives = 50/89 (56%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W +FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS
Sbjct: 348 WCWTYSFIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWL 407
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 270
P G+S +S ++ F F+G FF
Sbjct: 408 PYMYGISFDSVMMMAVFVCFFVGTNMTFF 436
Score = 43.6 bits (98), Expect = 0.003
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 252 SNITFFPQHFLGLAGIPRRYSDYPD 326
+N+TFFP HF GL G+PR+ DYPD
Sbjct: 431 TNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 77.4 bits (182), Expect = 2e-13
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+FLFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS G +
Sbjct: 347 IFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRT 406
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
+ +I F+ F GV FF
Sbjct: 407 YPETLGQIHFWITFFGVNLTFF 428
Score = 48.0 bits (109), Expect = 1e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFP HFLGL+G+PRR DYPD
Sbjct: 424 NLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.8 bits (178), Expect = 6e-13
Identities = 39/89 (43%), Positives = 51/89 (57%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS +
Sbjct: 431 WLVGF--IFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWW 488
Query: 184 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 270
P G SLN Y+L+ + +G FF
Sbjct: 489 PFIVGYSLNKYLLQGHWLLSMVGFNLCFF 517
Score = 35.9 bits (79), Expect = 0.63
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDY 320
N+ FFP H+LG+ G+PRR S Y
Sbjct: 513 NLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 75.4 bits (177), Expect = 8e-13
Identities = 40/75 (53%), Positives = 44/75 (58%)
Frame = +1
Query: 22 VVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 201
+ F GGLTGVILANSS DI LHDTYYVVAH HYVLS +PLFTGL
Sbjct: 262 IYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGL 321
Query: 202 SLNSYILKIQFFTIF 246
+L I F I+
Sbjct: 322 TLTMNIKNTIFSYIY 336
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 257 YNIFSTTFFRFSWNTSTIFRLSRLIYFMK 343
+NIFS+T S NT+T+F LS ++FMK
Sbjct: 340 FNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 75.4 bits (177), Expect = 8e-13
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
V LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TGLS
Sbjct: 348 VVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLS 407
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
+ + + F+ FIGV FF
Sbjct: 408 YSESLGQAHFWMTFIGVNFTFF 429
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N TFFP HFLG G+PRR DYPD
Sbjct: 425 NFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 68.1 bits (159), Expect = 1e-10
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS + + L +G
Sbjct: 101 LLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYR 160
Query: 205 LNSYILKIQFFTIFIG 252
+++L++Q + G
Sbjct: 161 SAAWLLRVQVVLLVWG 176
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/89 (38%), Positives = 46/89 (51%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +FLFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S +
Sbjct: 447 LGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMS 506
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFFHNIF 282
G + ++ F+ FIG FF F
Sbjct: 507 GRQYPEWAGQVHFWVFFIGTNITFFPQHF 535
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 252 SNITFFPQHFLGLAGIPRRYSDYPD 326
+NITFFPQHFLG G+PRRY DYPD
Sbjct: 526 TNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 210
+F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FTG ++
Sbjct: 368 IFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMS 427
Query: 211 SYILKIQFFTIFIGVI*HFF 270
+ K+ F+ F G FF
Sbjct: 428 ERLGKVAFWVTFAGFNLTFF 447
Score = 36.3 bits (80), Expect = 0.48
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFP H LGL G+PRR Y D
Sbjct: 443 NLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +1
Query: 22 VVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 201
+V +F GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P G
Sbjct: 405 LVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGR 464
Query: 202 SLNSYILKIQFFTIFIGVI*HFF 270
++ + I F+ F+G FF
Sbjct: 465 MMDEKLGYIHFWFTFVGAYLVFF 487
Score = 34.7 bits (76), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRY 311
+ FFP H++G+AG PRRY
Sbjct: 484 LVFFPMHYIGIAGFPRRY 501
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/80 (42%), Positives = 44/80 (55%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +FLF +GGLTGV LA S+ + L +TYYVV HFHYV++ +P T
Sbjct: 342 LGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMT 401
Query: 196 GLSLNSYILKIQFFTIFIGV 255
G N I K F+ F+GV
Sbjct: 402 GKMYNETIGKWAFWITFVGV 421
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 65.7 bits (153), Expect = 7e-10
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
+ LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 59 ILLFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
Score = 32.3 bits (70), Expect = 7.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 228 SIFYNIYWSNIT--FFPQHFLGLAGIPRRYSDYPD 326
+I++ ++ ++I F P H LG +PRR DYPD
Sbjct: 133 NIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 65.3 bits (152), Expect = 9e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG +N
Sbjct: 358 FMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNE 417
Query: 214 YILKIQFFTIFIGV 255
+ ++ F FIG+
Sbjct: 418 PLGRLHFILTFIGM 431
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + FT GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F
Sbjct: 52 LLFICTFTFGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFF 111
Query: 196 GLSL-NSYILKIQFFTIFIGVI 258
G +L + I+ + F+GV+
Sbjct: 112 GKTLRENTIIVLWSILFFVGVV 133
Score = 36.7 bits (81), Expect = 0.36
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYPD 326
+TF P HFLG +PRR DYPD
Sbjct: 134 LTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
L + FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 348 LLFICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLS 388
Score = 36.7 bits (81), Expect = 0.36
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYPD 326
+TF P HFLG +PRR DYPD
Sbjct: 430 LTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL P F+
Sbjct: 369 LGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFS 428
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFF 270
L+ + + F+ +FIG FF
Sbjct: 429 RNMLSERLGRWVFWLMFIGFNVTFF 453
Score = 40.3 bits (90), Expect = 0.029
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFP H GL G+PRR YPD
Sbjct: 449 NVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/85 (37%), Positives = 45/85 (52%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L V +F +GGL+G+ +A + +DI +HDTY++VAHFHYVL +P
Sbjct: 390 LSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMF 449
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFF 270
G +N KI F FI + FF
Sbjct: 450 GRMMNETAGKIHFALTFIFLNGTFF 474
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 62.9 bits (146), Expect = 5e-09
Identities = 32/85 (37%), Positives = 42/85 (49%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + F GGLTG+ L N +D+ L DT +VVAHFH V+ + YP T
Sbjct: 381 LGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVT 440
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFF 270
G LN + K F+ F+G FF
Sbjct: 441 GRMLNDVLGKFHFWVTFLGAYLIFF 465
Score = 36.3 bits (80), Expect = 0.48
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYPD 326
+ FFP H+LGL G+PRRY + D
Sbjct: 462 LIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 62.9 bits (146), Expect = 5e-09
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G FLF GGLTG++LA+ +D L D+Y+++AHFHY L +
Sbjct: 362 WSVGFMATFLF--GGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWF 419
Query: 184 PLFTGLSLNSYILKIQFFTIFIG 252
P TG ++ + KI F+ F+G
Sbjct: 420 PKMTGRMMDERLGKIHFWLTFVG 442
Score = 33.5 bits (73), Expect = 3.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 261 TFFPQHFLGLAGIPRRYSDYPD 326
TF QH++G G+PRRY+DY D
Sbjct: 446 TFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 62.1 bits (144), Expect = 8e-09
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG+TGV LA+ +D+ LH TYYVV HFHY++ +PL+TG
Sbjct: 432 FILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQR 491
Query: 214 YILKIQFFTIFIGVI*HFF 270
+ K+ F+ IG FF
Sbjct: 492 TLGKMHFWLSMIGTNITFF 510
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 222 KNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDY 320
K + ++ +NITFF LG G+PRRY+ Y
Sbjct: 495 KMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 61.7 bits (143), Expect = 1e-08
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
+ +F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS
Sbjct: 344 IMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLS 384
Score = 38.3 bits (85), Expect = 0.12
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 252 SNITFFPQHFLGLAGIPRRYSDYP 323
SN+ FFP H LG+ PRR SDYP
Sbjct: 423 SNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/82 (37%), Positives = 44/82 (53%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ +F +GGLTGV++A+ D +HDTY+VVAHFHYVL +P TG
Sbjct: 360 IVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRM 419
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
++ + + F IF G FF
Sbjct: 420 MSETLGRWSFGLIFSGFNLTFF 441
Score = 36.3 bits (80), Expect = 0.48
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDY 320
N+TFFP H LGL G+PRR Y
Sbjct: 437 NLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P
Sbjct: 379 LGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMF 438
Query: 196 GLSLNSYILKIQFFTIFIGV 255
G L + KI F+ F+G+
Sbjct: 439 GRRLGERLGKIHFWFTFLGL 458
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 210
+F VGGL+G+ +A +D+ HDTY++VAHFHY+L +P G +N
Sbjct: 398 MFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMN 457
Query: 211 SYILKIQFFTIFIGVI*HFF 270
+ K F FIG FF
Sbjct: 458 EKLGKTHFVLTFIGANGTFF 477
Score = 40.3 bits (90), Expect = 0.029
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 252 SNITFFPQHFLGLAGIPRRYSD 317
+N TFFP HFLG+ G+PRRY+D
Sbjct: 472 ANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
V +F VGG++GV+ A +D L DTY+VVAH HYVL +P FTG
Sbjct: 380 VLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRM 439
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
+N K+ F+ + +G FF
Sbjct: 440 MNERFGKLTFWVVLVGFNLGFF 461
Score = 33.9 bits (74), Expect = 2.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYP 323
N+ FFP H GL G+PRR YP
Sbjct: 457 NLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+
Sbjct: 356 FVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHE 415
Query: 214 YILKIQFFTIFIGVI*HFF 270
+ KI F FIG FF
Sbjct: 416 TMGKISFVLFFIGFHLTFF 434
Score = 32.3 bits (70), Expect = 7.8
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRR 308
++TFF QHF+GL G+PRR
Sbjct: 430 HLTFFIQHFVGLMGMPRR 447
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/79 (39%), Positives = 41/79 (51%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + +F GG++G LA SIDI LH TY+VV HFH V+ +P T
Sbjct: 389 LGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMT 448
Query: 196 GLSLNSYILKIQFFTIFIG 252
G +N + KI F+ FIG
Sbjct: 449 GHMMNETLGKIHFWGTFIG 467
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ TG
Sbjct: 401 FIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQK 460
Query: 214 YILKIQFFTIFIG 252
+ F+T +G
Sbjct: 461 RLAHAHFWTALVG 473
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N TFFPQHFLGL G+PRR SDYPD
Sbjct: 529 NATFFPQHFLGLQGMPRRISDYPD 552
Score = 43.6 bits (98), Expect(2) = 6e-08
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 14/48 (29%)
Frame = +1
Query: 16 LQVVFLFTVGGL--------------TGVILANSSIDITLHDTYYVVA 117
L VFLFT+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 401 LGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 35.5 bits (78), Expect(2) = 6e-08
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 97 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVI*HFFHN 276
+T + HFHYVLS P G + + + K+QF+ +FIGV FF
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 277 IF 282
F
Sbjct: 536 HF 537
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL + +PL TG
Sbjct: 300 VFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKY 359
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
+ K+ F+ IF G +F
Sbjct: 360 YPENLGKLSFWLIFAGANIFYF 381
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 58.8 bits (136), Expect = 8e-08
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 VVFL--FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
V FL F +GGLTG++ A ID L DTY+VVAHFHYVL +P T
Sbjct: 360 VAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMT 419
Query: 196 GLSLNSYILKIQFFTIFIG 252
G LN I +QF+ +G
Sbjct: 420 GRMLNERIGILQFWLWVLG 438
Score = 36.3 bits (80), Expect = 0.48
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TF QHFLGL G+PRR Y D
Sbjct: 440 NMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 58.8 bits (136), Expect = 8e-08
Identities = 26/43 (60%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 LQVVFL--FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
LQV F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 324 LQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
Score = 32.7 bits (71), Expect = 5.9
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 165 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPD 326
G+Y L S++ PF L S+F ++ S F QHF G + +PRRY + D
Sbjct: 376 GLYYLSSYLSLPFSLPLSGYASLF--VFSSFSVFALQHFQGYSAMPRRYFMHSD 427
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 58.4 bits (135), Expect = 1e-07
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 354 FVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 36.7 bits (81), Expect = 0.36
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYPD 326
+TF P HF G + +PRR DYPD
Sbjct: 430 LTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG+TGV+LA ++ D H+TY++V+HFHYVL YP G LN
Sbjct: 387 FVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNE 446
Query: 214 YILKIQFFTIFIGVI*HFFHNIF 282
I K F+ IG FF F
Sbjct: 447 RIGKWFFWIFMIGFNICFFPQYF 469
Score = 36.7 bits (81), Expect = 0.36
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDY 320
NI FFPQ+FLGL G+PRR Y
Sbjct: 461 NICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 210
+FT GGLTGV++A + D +HDTY++VAH HY L YP+ T +L+
Sbjct: 388 VFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALS 447
Query: 211 SYILKIQFFTIFIG 252
+ + F+ +F G
Sbjct: 448 ERLGRWSFWLLFTG 461
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYP 323
N+TF P H GL G+PRR YP
Sbjct: 463 NVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FTG
Sbjct: 373 FIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYE 432
Query: 214 YILKIQFFTIFIG 252
+ K+ F FIG
Sbjct: 433 GLGKVHFVLTFIG 445
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +F+F +GG+TGV++A ++ HD+Y+VVAH HYVL P FT
Sbjct: 383 LGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFT 442
Query: 196 GLSLNSYILKIQFFTIFIGVI*HFF 270
G ++ + K F+ +F G FF
Sbjct: 443 GRMMSERLGKWVFWLMFSGFNLAFF 467
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 56.4 bits (130), Expect = 4e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 411 NLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + LF +GG+TGV L +D TY+VVAHFHYV+ YP T
Sbjct: 363 LGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKIT 421
Query: 196 GLSLNSYILKIQFFTIFIG 252
G N + KIQF F+G
Sbjct: 422 GKMYNETLGKIQFGVYFLG 440
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P T
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMT 410
Query: 196 GLSLNSYILKIQFFTIFIGVI 258
G + + ++ F+ +G +
Sbjct: 411 GRMYDERLGRLHFWLFLVGYL 431
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 55.2 bits (127), Expect = 1e-06
Identities = 47/108 (43%), Positives = 53/108 (49%)
Frame = +1
Query: 199 LSLNSYILKIQFFTIFIGVI*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLY 378
LS++SY K F +I F NIF LEYLDDI IIQ EI F H F
Sbjct: 401 LSIHSYS-KFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHHSDLTFHC 459
Query: 379 YQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIRTTNF 522
Y LLFENQ EL Y + LND KIY QQ+IH+ F
Sbjct: 460 LPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 423 NQRINLFSLNLPSSIE*YQNLPPAEHSY 506
NQRI LFSLN+PSSIE YQNLPPAEHSY
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSY 478
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVA 117
+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 362 IVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ +F +GG++GV LA+ I++ D+YYVVAH HYVL +P TG
Sbjct: 362 ISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRM 421
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
L+ + K QF+ + I FF
Sbjct: 422 LDERLGKWQFWLMLISFNLTFF 443
Score = 33.1 bits (72), Expect = 4.5
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDY 320
N+TFFP H G AG+PRR Y
Sbjct: 439 NLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 358 FCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLS 392
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
FT+GGL+G + A + D HDTY+VVAHFHYVL + +P G L+
Sbjct: 367 FTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDE 426
Query: 214 YILKIQFFTIFIG 252
+ + F IF G
Sbjct: 427 RLGRWSFALIFTG 439
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/66 (42%), Positives = 31/66 (46%)
Frame = +3
Query: 309 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNLP 488
YSDYPD NQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 489 PAEHSY 506
P+EHSY
Sbjct: 61 PSEHSY 66
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 52.4 bits (120), Expect = 7e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
+F GG+TG+ LA S+D+ HDTY++VAHFH+++
Sbjct: 363 LFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIM 399
Score = 35.9 bits (79), Expect = 0.63
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N TF PQ LG G+PRRY YP+
Sbjct: 440 NFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/82 (34%), Positives = 37/82 (45%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ LF G GV+ A +D T HDTY+VV HFH + +P TG
Sbjct: 346 IALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRM 405
Query: 205 LNSYILKIQFFTIFIGVI*HFF 270
N + KI F F+G + FF
Sbjct: 406 YNEKLGKIHFVFSFVGAVLLFF 427
Score = 34.7 bits (76), Expect = 1.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYP 323
+ FF QH LG+ G+PRR DYP
Sbjct: 424 LLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 52.0 bits (119), Expect = 9e-06
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +1
Query: 10 CGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
CG +F GG+TG+ L S+D+ HDTY+VVAHFH+++
Sbjct: 367 CGF--LFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIM 406
Score = 35.9 bits (79), Expect = 0.63
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDYPD 326
N TF PQ LG G+PRRY +YP+
Sbjct: 447 NATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 51.6 bits (118), Expect = 1e-05
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
L +FLF +GG+TG++LAN +D +H+T ++VAHFH
Sbjct: 405 LAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFH 441
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GGLTGV++A D +HDTY++VAH HYVL P FTG
Sbjct: 363 FVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYF 422
Query: 214 YILKIQFFTIFIG 252
+ F+ + IG
Sbjct: 423 NLGPTAFWLVVIG 435
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 51.6 bits (118), Expect = 1e-05
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 138
+ + LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 502 MSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +3
Query: 243 IYWSN---ITFFPQHFLGLAGIPRRYSDYP 323
IY+S + F PQ +LG +G+PRR DYP
Sbjct: 575 IYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG TGV L + +ID TY+VVAHFHY+L +P TG + +
Sbjct: 355 FIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSE 414
Query: 214 YILKIQFFTIFIGV 255
+ KI F +GV
Sbjct: 415 RLGKIHFALAMLGV 428
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + F VGG+TGV ++D+ LHDTY+V+ HFHY+++ +P T
Sbjct: 351 LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLT 409
Query: 196 GLSLNSYILKIQFFTIFIG 252
G + + +I + I +G
Sbjct: 410 GRWYDERLARISWALITVG 428
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
L +F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 39.5 bits (88), Expect = 0.051
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 255 NITFFPQHFLGLAGIPRRYSDY 320
NITFFP HF GLAG+PRR Y
Sbjct: 510 NITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 49.2 bits (112), Expect = 6e-05
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 213
F +GG++GV ++ +ID +H YYVVAHFHY + +P FTG +
Sbjct: 376 FMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSE 435
Query: 214 YILKIQFFTIFIGVI*HFFHNIF 282
+ +I + + GV +F F
Sbjct: 436 KLGRIHWAFAYPGVNILYFPMFF 458
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G V F ++GG+TGV+LA D LH++ +++AHFH + +
Sbjct: 384 WTLGFMVTF--SIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWF 441
Query: 184 PLFTGLSLNSYILKIQFFTIFIG 252
P G LN + K F+ IG
Sbjct: 442 PKVFGFKLNDKLGKASFWFWQIG 464
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G + F ++GG+TGV+LA D LH++ +V+AHFH V+ +
Sbjct: 383 WTLGFMITF--SIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWF 440
Query: 184 PLFTGLSLNSYILKIQFF 237
P G +LN K F+
Sbjct: 441 PKAFGFTLNEKWGKAAFW 458
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 363 FVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVL 396
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++ +P
Sbjct: 404 LGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLF 462
Query: 196 GLSLNSYILKIQFFTIFIGVI 258
G L++ + F++ +G +
Sbjct: 463 GFHLDAPSARANFWSFSVGTV 483
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 195
L + F +GGLTG+ A+ D+ LH+TY+V+AHFH +P T
Sbjct: 433 LMAMMNFLIGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVT 492
Query: 196 GLSLNSYILKIQFFTIFI 249
G +N + K + F+
Sbjct: 493 GRKINEFWGKFHAWWSFV 510
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYY 108
L + LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 341 LGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/83 (32%), Positives = 37/83 (44%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 183
W G +F F +GG+TGV L D + +YYVVAHFH V+ +
Sbjct: 357 WLIGF--IFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWW 414
Query: 184 PLFTGLSLNSYILKIQFFTIFIG 252
P TG L+ + F+ IG
Sbjct: 415 PKMTGRFLDEKVGLAHFWLFMIG 437
Score = 37.1 bits (82), Expect = 0.27
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 258 ITFFPQHFLGLAGIPRRYSDYP 323
+TF PQ+ LGL G+PRRY YP
Sbjct: 440 LTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 46.0 bits (104), Expect = 6e-04
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHD 99
+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 345 LFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
+ + +F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 340 ISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL-F 192
+ + +F++GG +GVIL+ ++D H++ +++AHFH V+ Y L +
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIY 439
Query: 193 TGLSLNSYILKIQFFTIF--IGVI*HFF 270
LN+ K F +F IGVI FF
Sbjct: 440 NNCELNN---KFNFNILFWLIGVILTFF 464
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 44.0 bits (99), Expect = 0.002
Identities = 33/89 (37%), Positives = 43/89 (48%)
Frame = +1
Query: 220 LKIQFFTIFIGVI*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y* 399
LK F+ +I HF HNIF EYLDDIQI + E+ + +L +
Sbjct: 114 LKFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISY 173
Query: 400 LLFENQ*LTNELTYFL*ISHHQLNDIKIY 486
LLFE + + YFL H LND KI+
Sbjct: 174 LLFEKELSQIDQFYFLLNYRHLLNDTKIF 202
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 43.2 bits (97), Expect = 0.004
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 423 NQRINLFSLNLPSSIE*YQNLPPAEHSY 506
N+ I LFSLN+ SSIE QN PPAEHSY
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSY 43
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.013
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 40.7 bits (91), Expect = 0.022
Identities = 24/67 (35%), Positives = 28/67 (41%)
Frame = +3
Query: 306 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 485
RY+DYP+ QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 486 PPAEHSY 506
PPAEHSY
Sbjct: 61 PPAEHSY 67
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 40.3 bits (90), Expect = 0.029
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 43 GGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY-I 219
GG G+I + +D T+H+T ++ HFH + + + +P TG +L +
Sbjct: 341 GGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRL 400
Query: 220 LKIQFFTIFIGVI 258
++ Q + FIG+I
Sbjct: 401 MRWQLWLWFIGMI 413
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 40.3 bits (90), Expect = 0.029
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 285 GLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSS 464
GL G+PRRYSDYP+ +++ +F LNL +S
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNS 60
Query: 465 IE*YQNLPPAEHSY 506
I N+PP H+Y
Sbjct: 61 IGWIHNMPPIGHTY 74
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 39.5 bits (88), Expect = 0.051
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 426 QRINLFSLNLPSSIE*YQNLPPAEHSY 506
QRI LF N+ SSIE +QN PPA HSY
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSY 54
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.051
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 38.7 bits (86), Expect = 0.090
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 114 FIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 38.3 bits (85), Expect = 0.12
Identities = 26/86 (30%), Positives = 31/86 (36%)
Frame = +3
Query: 24 CIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWGIY*LISFIYRPF 203
C FI+ N +FSQF CNY IY L+ + F
Sbjct: 48 CFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLRSFNSSSICNYISIYPLMPPLNWTF 107
Query: 204 IKFLYTKNSIFYNIYWSNITFFPQHF 281
K KNSI+ NIY S F F
Sbjct: 108 YKSKMIKNSIYNNIYSSKSNIFSPTF 133
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 37.9 bits (84), Expect = 0.16
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ LF GG G+I A+ +I++ +H+T ++ HFH + P TG
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRR 418
Query: 205 LNSYILK-IQFFTIFI--GVI*HFFH 273
L S + +Q +T F+ G+ H+ H
Sbjct: 419 LWSPTMALVQAWTWFVGMGIFSHWMH 444
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 37.9 bits (84), Expect = 0.16
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3
Query: 153 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLA 293
CNY GIY L+ I K L KNSIFYNI+ F F ++
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSIS 137
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.21
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.7 bits (81), Expect = 0.36
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
L ++ +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.7 bits (81), Expect = 0.36
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +1
Query: 22 VVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
++F F +GG+TGV++ +++T H+T+ V HFH
Sbjct: 366 ILFGF-MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.48
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 58 VILANSSIDITLHDTYYVVAHFHYV 132
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.9 bits (79), Expect = 0.63
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 204
+ + +GG G++ A+ +++ +H+T +V HFH + + +P G
Sbjct: 337 LLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAYKLWPELCGRR 396
Query: 205 LNSYILK-IQFFTIFIGVI 258
L S L +Q + FIG++
Sbjct: 397 LYSVDLALVQLWGWFIGMV 415
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.63
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 135
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 426 QRINLFSLNLPSSIE*YQNLPPAEHSY 506
+++ +F LNL +SIE NLPP EHSY
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSY 59
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 16 LQVVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 353 LLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 34.7 bits (76), Expect = 1.5
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 423 NQRINLFSLNLPSSIE*YQNLPPAEHSY 506
+QR +F + L SS+E QN PPAEHSY
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSY 59
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 1.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 25 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_A2ECM7 Cluster: Cell cycle control protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Cell cycle control
protein, putative - Trichomonas vaginalis G3
Length = 241
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -1
Query: 372 KYMNLMKKLYFMKYMSLDNLNIVEVFQLNLKNVVEKMLYYSNKYCKKLNF*YIRI**KAC 193
K N + FM M++ N E K K L Y++ Y ++N I I KAC
Sbjct: 25 KPQNGQHTIRFMLPMAIKCTNCGEYMHAGTKANARKELCYTDAYLGEINVYRIYIHCKAC 84
Query: 192 K*RISVNKSPNNCKY 148
I++ P +C Y
Sbjct: 85 YAEITIKTDPEHCDY 99
>UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA -
Sulfolobus metallicus
Length = 595
Score = 33.9 bits (74), Expect = 2.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 4 WKCGLQVVFLFTVGGLTGVILANS-----SIDITLHDTYYVVAHFHYVLS 138
W GL +F V + G I A S+D T+H+T ++ +HFH +L+
Sbjct: 353 WDAGLAFIFAAAVWNIIGGIQAEPTQPTPSVDPTVHNTLWLPSHFHIMLA 402
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 33.5 bits (73), Expect = 3.4
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3
Query: 423 NQRINLFSLNLPSSIE*YQNLPPAEHSY 506
N++I LF +SIE QNLPPAEHSY
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSY 47
>UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE
PROTEIN MALC; n=1; Mycoplasma pulmonis|Rep: MALTODEXTRIN
ABC TRANSPORTER PERMEASE PROTEIN MALC - Mycoplasma
pulmonis
Length = 1034
Score = 33.1 bits (72), Expect = 4.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 346 IFHEIYESG*SEYRRGIPAKPKKCCGKNVILLQ*IL*KI-EFLVYKNLMKGL 194
+ H+IY+S E ++ IP + KK K L+ IL + E L++K KG+
Sbjct: 570 LLHKIYQSKILEAQKSIPTENKKYASKKGFLINLILPGLAEILIFKQYWKGI 621
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 33.1 bits (72), Expect = 4.5
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +3
Query: 423 NQRINLFSLNLPSSIE*YQNLPPAEHSY 506
++R+ +F +++P+S+E + PPA+HSY
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSY 50
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 4.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 31 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 5.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 46 GLTGVILANSSIDITLHDTYYVVAHFHYVL 135
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 5.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 34 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 126
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 32.3 bits (70), Expect = 7.8
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 438 LFSLNLPSSIE*YQNLPPAEHSY 506
+FSL+L SSIE + PPA+HSY
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSY 59
>UniRef50_Q7RBQ6 Cluster: Putative uncharacterized protein PY06083;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06083 - Plasmodium yoelii yoelii
Length = 1402
Score = 32.3 bits (70), Expect = 7.8
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = -1
Query: 375 EKYMNLMKKLYFMKYMSL---DNLNIVEVFQLNLKNVVEK 265
E+++NLM + YF+KY+++ +N+ I F L +K +EK
Sbjct: 249 ERHINLMDQSYFIKYINILLYNNIKIENSFFLFIKKYIEK 288
>UniRef50_A0CBW4 Cluster: Chromosome undetermined scaffold_165, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 3045
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -1
Query: 372 KYMNLMKKLYFMKYMSLD-NLNIVEVFQLNLKNVVEKMLYYSNK 244
KY +++K +YF KY SLD + I ++ QLN +++ L Y+ K
Sbjct: 1465 KYNSVIKFIYFQKYSSLDQTIQISQLSQLN-NQLIDATLTYNMK 1507
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,720,197
Number of Sequences: 1657284
Number of extensions: 5554083
Number of successful extensions: 15561
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 15022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15539
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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