Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0687
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 79 3e-15
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 75 6e-14
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710... 70 1e-12
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 70 2e-12
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 65 4e-11
07_03_0524 - 19037638-19038294 33 0.15
07_03_1733 + 29117547-29118203 33 0.20
02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512... 33 0.26
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 31 1.0
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.0
12_01_0144 - 1097579-1097604,1097940-1098127,1098567-1098720,109... 30 1.8
08_01_1010 - 10215625-10216335,10216372-10216473 30 1.8
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 30 1.8
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 29 2.4
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 29 3.2
09_06_0119 - 20969450-20969643,20969767-20970088,20970147-209703... 29 4.2
07_03_0549 - 19352545-19353420 29 4.2
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 28 5.6
04_03_0904 + 20717005-20718087 28 5.6
03_06_0567 + 34771476-34772234 28 7.4
03_06_0391 - 33577872-33578093,33578556-33579218 28 7.4
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 28 7.4
11_01_0142 - 1169007-1169032,1169351-1169538,1169978-1170131,117... 27 9.7
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 27 9.7
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 310 STMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 489
+ +LA A +EQK MLG RL+PL++R HPDLA KITGMLLE+ NSE++ +L + L AK
Sbjct: 440 NNLLATAPPEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLSAK 499
Query: 490 VDEAV 504
++E V
Sbjct: 500 IEECV 504
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +1
Query: 310 STMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 489
+T LA A +Q+ MLGE L+PL+ ++ + A K+TGMLLE+D +E+LH+LE E+LKAK
Sbjct: 567 ATALANAAPDQQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAK 626
Query: 490 VDEAV 504
V EA+
Sbjct: 627 VAEAM 631
>08_02_0163 +
13470178-13470335,13470635-13470656,13470885-13471055,
13471157-13471363,13471458-13471700
Length = 266
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/65 (47%), Positives = 49/65 (75%)
Frame = +1
Query: 310 STMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 489
++ LA + +Q+ MLGE L+PL+ ++ D A K+TGMLLE+D +E+LH++E ++LKAK
Sbjct: 173 ASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAK 232
Query: 490 VDEAV 504
V EA+
Sbjct: 233 VAEAM 237
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +1
Query: 304 LTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 483
LTS LA A ++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LE E+LK
Sbjct: 578 LTSA-LANANPEQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALK 636
Query: 484 AKVDEAV 504
+KV EA+
Sbjct: 637 SKVAEAM 643
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/77 (38%), Positives = 53/77 (68%)
Frame = +1
Query: 274 PAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 453
P +Q T LA A ++Q+++LG+ LFPL++++ + A K+TGMLLE+D +E+L
Sbjct: 560 PVGELQAPSNNLQTSLASANPEQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVL 619
Query: 454 HMLEHAESLKAKVDEAV 504
+++E ++L+ KV EA+
Sbjct: 620 NLVESPDTLRDKVAEAM 636
>07_03_0524 - 19037638-19038294
Length = 218
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 26 AQPPV--RPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQ 166
A PPV RP+T AA+A +PT P Q ++RT +G +TG Q
Sbjct: 61 APPPVPGRPATSAAAAATANEPT--PTIEKGTQVSVRTRVGKISVTGHQ 107
>07_03_1733 + 29117547-29118203
Length = 218
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 23 NAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPP 202
+A PP P+ S + + RP+ PA+ + LG P G+ G + AS R P
Sbjct: 65 SAPPPTMPAITCESVL--VADSARPSPAGPARRHQQQQLGLGPAGGRAGKRRSRASKRAP 122
Query: 203 LVSXSXRPAYYK 238
S PA ++
Sbjct: 123 TTYISTDPANFR 134
>02_01_0687 -
5118774-5119412,5120359-5120424,5120636-5120690,
5120795-5121354
Length = 439
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 26 AQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
A PP QAASAY + Q A P QST ++ AR Q + + A + P
Sbjct: 323 ATPPSYAWGQAASAYGSAQVPQSHASGPPVQSTSYSATTARNFGSAQALPSYAHAQEQPS 382
Query: 206 VSXSXRPAYY 235
+ P+ Y
Sbjct: 383 YGHAQLPSSY 392
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 FPLIQRMHPDLAGKITGMLL--EIDNSELLHMLEHAE-SLKAKVDEAVADCRLI 522
F +QR+ P+ GKI G++L E D EL+ + E +L AK+++ A +I
Sbjct: 11 FARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVI 64
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +2
Query: 5 PTTPRWN----AQPPVRPS---TQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQ 163
PT+P +N A P PS T + +Y+ P+Y P P+ S TS P +
Sbjct: 1678 PTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPT--SPSYSYSPTSPSYSPTSPS 1735
Query: 164 QGVAAAAASIRPPLVSXSXRPAYYKYTPNMPTH 262
+ + S P S S P Y+P P++
Sbjct: 1736 YNYSPTSPSYSP--TSPSYSPTSPSYSPTSPSY 1766
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAA 184
PT+P +N P + + +Y+ P+Y + P+ S S P + + +
Sbjct: 1692 PTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTS--PSYSPTS 1749
Query: 185 ASIRPPLVSXSXRPAYYKYTPNMPTH 262
S P S S P Y+P P++
Sbjct: 1750 PSYSP--TSPSYSPTSPSYSPTSPSY 1773
>12_01_0144 -
1097579-1097604,1097940-1098127,1098567-1098720,
1098825-1099092,1099310-1099550,1099669-1099833,
1099898-1100298
Length = 480
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 367 LFPLIQRMHPDLAGKITGMLLEIDNSEL 450
+F +Q + P+LA I GMLL DN+E+
Sbjct: 10 VFARLQALEPNLAPNIIGMLLTKDNNEM 37
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/85 (31%), Positives = 33/85 (38%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAA 184
PTTPR A P PST A P Y P+ P + S P T AA+
Sbjct: 92 PTTPRRAASPDYTPSTPTPPRRA-ASPDYTPSTPPPRAA----SPDYTPSTPTPPRRAAS 146
Query: 185 ASIRPPLVSXSXRPAYYKYTPNMPT 259
+ P + A YTP+ PT
Sbjct: 147 PNYTPS--TPQRHAASPDYTPSTPT 169
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Frame = +2
Query: 11 TPRWNAQPPVRPSTQAASAYANMQPT--YRPAXXXPAQSTIRTSLGARPITGQQGV---A 175
TP + +PP P++ YAN PT P PA A+P QG A
Sbjct: 528 TPSTSVRPPQPPASDGPYYYANNMPTAPLGPPMFPPAYGGQPMVYNAQPGPSPQGYMHPA 587
Query: 176 AAAASIRPPLVSXSXRPAYYKYTP 247
++ RP YY Y P
Sbjct: 588 GPQLQYGQQMMMGQTRPVYY-YAP 610
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGAR--PITGQQGVAAA 181
+TP +A+P V P T A + A +Q+ + TS A+ TG AA
Sbjct: 384 STPPSSARPSVVPPTGFAQFAMTQAAHFSQAAGSASQAAVSTSHSAQFWQYTGTSSQAAG 443
Query: 182 AASIRPPL 205
+S PPL
Sbjct: 444 TSSQGPPL 451
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 8 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGAR--PITGQQGVAAA 181
+TP +A+P V P T A + A +Q+ + TS A+ TG AA
Sbjct: 258 STPPSSARPSVVPPTGFAQFAMTQAAHFSQAAGSASQAAVSTSHSAQFWQYTGTSSQAAG 317
Query: 182 AASIRPPL 205
+S PPL
Sbjct: 318 MSSQGPPL 325
>09_06_0119 -
20969450-20969643,20969767-20970088,20970147-20970380,
20970659-20970789,20970874-20971147
Length = 384
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 292 GQEPLTSTMLAXAXLQEQKQMLGE 363
G +PLTST++A +QEQ M E
Sbjct: 126 GYDPLTSTLVAVLPMQEQLNMFAE 149
>07_03_0549 - 19352545-19353420
Length = 291
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 32 PPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAAAS 190
P + PS + A+A A+ +RPA + + R GAR T + + S
Sbjct: 5 PQILPSPRLAAAAASPNSAFRPAPRLHSSAPARRGRGARLATAASASGSGSGS 57
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRT-SLGARPITGQQ--GVA 175
PT P+ PP ++ AS +++ T++ ++T T SLG P T + +
Sbjct: 271 PTAPQGEQPPPADSLSEKASVFSSQSTTHKSIASPSKKNTSSTPSLGNFPSTADKPPRIH 330
Query: 176 AAAASIR 196
A +SIR
Sbjct: 331 ADMSSIR 337
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 5 PTTPRWNAQP-PVRPSTQAASAYANMQPTYRPA 100
PT P + QP P P T N PTY+PA
Sbjct: 213 PTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPA 245
>03_06_0567 + 34771476-34772234
Length = 252
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +1
Query: 241 YTKHANPPAPQPAVHIQGQEPLTSTMLAXAXLQ----EQKQMLGERLFPLIQRMHPDLAG 408
+ HA+PP P P H+ + P + + A A + E ++ FP + + G
Sbjct: 24 FVLHAHPPPPPP--HVVRRPPSSDELPAAADVTVCKVEGGLLMSPSTFPYFMLVALEAGG 81
Query: 409 KITGMLLEIDNSELLHMLEHAESLKAKVDEAVADCR 516
G+LL + LL +L H + K V + A R
Sbjct: 82 LFRGLLLLLLYPVLL-LLGHDRATKLMVMVSFAGVR 116
>03_06_0391 - 33577872-33578093,33578556-33579218
Length = 294
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 238 IYTKHANPPAPQPAVHIQGQEPLTS 312
++ +HA PP P+P V +Q P T+
Sbjct: 2 LHEQHAPPPQPEPEVSLQLSAPATA 26
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPA-XXXPAQSTIRTSLGARPITGQQGVAAA 181
P RW PP A++ + PT P+ P + GAR A++
Sbjct: 3 PRKSRWGPPPPAGEKGAGAASTSARTPTPTPSTAGDPRRHPPPPGPGAR-----NPAASS 57
Query: 182 AASIRPPLVSXSXRPAYYKYTPNMPTHQLHN 274
AA+ RPP +P TP P++ HN
Sbjct: 58 AAAFRPP-PQPQQQPRV--ETPPPPSYGFHN 85
>11_01_0142 -
1169007-1169032,1169351-1169538,1169978-1170131,
1170565-1170656,1170782-1170961,1171080-1171244,
1171309-1171709
Length = 401
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 367 LFPLIQRMHPDLAGKITGMLLEIDNSEL 450
+F +Q + P+LA I GMLL D +E+
Sbjct: 10 VFARLQALEPNLAPNIIGMLLTKDKNEM 37
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +2
Query: 53 QAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSXSXRPAY 232
QAA AN PA + + G+ P +GQ G AAA A+ +P +P Y
Sbjct: 595 QAAQNNANYGYQGAPADPNYGNAYPQAGYGSTPASGQAGYAAAPAAGQP----GYGQPGY 650
Query: 233 YKYTPNMPTH 262
+ N P +
Sbjct: 651 TQPPTNPPAY 660
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,797,481
Number of Sequences: 37544
Number of extensions: 299969
Number of successful extensions: 1126
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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