Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0687
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 140 5e-33
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 140 5e-33
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 140 5e-33
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 140 5e-33
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 140 5e-33
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 140 5e-33
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 140 5e-33
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 140 5e-33
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 140 5e-33
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 140 5e-33
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 140 5e-33
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 140 5e-33
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 140 5e-33
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 140 5e-33
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 138 1e-32
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 138 2e-32
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 138 2e-32
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 138 2e-32
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 138 2e-32
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 138 2e-32
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 138 2e-32
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 125 1e-28
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 124 3e-28
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 124 3e-28
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 124 3e-28
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 124 3e-28
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 124 3e-28
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 123 6e-28
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 123 6e-28
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 123 6e-28
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 113 4e-25
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 112 9e-25
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 112 9e-25
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 64 5e-10
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 64 5e-10
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 64 5e-10
AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open read... 51 3e-06
DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor pr... 35 0.22
AJ272138-1|CAC20425.1| 379|Homo sapiens G protein coupled recep... 35 0.22
AF232905-1|AAG44303.1| 379|Homo sapiens putative GPCR interacti... 35 0.22
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 34 0.38
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 34 0.38
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 34 0.38
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 34 0.38
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 34 0.38
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 33 1.2
BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein pr... 32 2.0
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 32 2.0
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 32 2.0
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 31 2.7
AY515311-1|AAS87212.1| 924|Homo sapiens sONE protein. 31 2.7
AK096734-1|BAC04853.1| 340|Homo sapiens protein ( Homo sapiens ... 31 2.7
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 31 2.7
AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein. 31 2.7
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 31 3.5
U13660-1|AAA57007.1| 501|Homo sapiens cartilage-derived morphog... 31 4.7
AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens ... 31 4.7
AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein. 31 4.7
X80915-1|CAA56874.1| 501|Homo sapiens Gdf5 protein. 30 8.2
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 30 8.2
X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur kerati... 30 8.2
BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated prot... 30 8.2
BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated prot... 30 8.2
BC032495-1|AAH32495.1| 501|Homo sapiens GDF5 protein protein. 30 8.2
AL121586-3|CAB89416.1| 501|Homo sapiens growth differentiation ... 30 8.2
AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer kerat... 30 8.2
AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated prot... 30 8.2
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 601 ELLHMLESPESLRSKVDEAVA 621
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 601 ELLHMLESPESLRSKVDEAVA 621
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 617 ELLHMLESPESLRSKVDEAVA 637
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 617 ELLHMLESPESLRSKVDEAVA 637
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 528 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 587
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 588 ELLHMLESPESLRSKVDEAVA 608
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 601 ELLHMLESPESLRSKVDEAVA 621
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 617 ELLHMLESPESLRSKVDEAVA 637
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 512 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 571
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 572 ELLHMLESPESLRSKVDEAVA 592
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 307 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 366
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 367 ELLHMLESPESLRSKVDEAVA 387
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 95 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 154
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 155 ELLHMLESPESLRSKVDEAVA 175
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 601 ELLHMLESPESLRSKVDEAVA 621
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 617 ELLHMLESPESLRSKVDEAVA 637
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 512 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 571
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 572 ELLHMLESPESLRSKVDEAVA 592
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 140 bits (338), Expect = 5e-33
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 255 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 314
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEAVA
Sbjct: 315 ELLHMLESPESLRSKVDEAVA 335
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 138 bits (335), Expect = 1e-32
Identities = 67/80 (83%), Positives = 72/80 (90%)
Frame = +1
Query: 268 PQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSE 447
P PAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSE
Sbjct: 419 PHPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 478
Query: 448 LLHMLEHAESLKAKVDEAVA 507
LLHMLE ESL++KVDEAVA
Sbjct: 479 LLHMLESPESLRSKVDEAVA 498
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 138 bits (334), Expect = 2e-32
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +1
Query: 265 APQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 444
APQPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 268 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 327
Query: 445 ELLHMLEHAESLKAKVDEAVA 507
ELLHMLE ESL++KVDEA A
Sbjct: 328 ELLHMLESPESLRSKVDEAAA 348
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 138 bits (333), Expect = 2e-32
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 531 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 590
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHMLE ESL++KVDEAVA
Sbjct: 591 LHMLESPESLRSKVDEAVA 609
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 138 bits (333), Expect = 2e-32
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHMLE ESL++KVDEAVA
Sbjct: 594 LHMLESPESLRSKVDEAVA 612
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 138 bits (333), Expect = 2e-32
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHMLE ESL++KVDEAVA
Sbjct: 594 LHMLESPESLRSKVDEAVA 612
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 138 bits (333), Expect = 2e-32
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHMLE ESL++KVDEAVA
Sbjct: 594 LHMLESPESLRSKVDEAVA 612
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 138 bits (333), Expect = 2e-32
Identities = 67/79 (84%), Positives = 72/79 (91%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPAVH+QGQEPLT++MLA A QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHMLE ESL++KVDEAVA
Sbjct: 594 LHMLESPESLRSKVDEAVA 612
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 125 bits (302), Expect = 1e-28
Identities = 63/79 (79%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
QPA+H+QGQEPLT +MLA A QEQKQMLGE LFPLIQ MHP LAGKITG+LLEIDNSEL
Sbjct: 45 QPAIHVQGQEPLTVSMLASAP-QEQKQMLGEWLFPLIQAMHPTLAGKITGVLLEIDNSEL 103
Query: 451 LHMLEHAESLKAKVDEAVA 507
LHML+ ESL +KVDEAVA
Sbjct: 104 LHMLKSPESLHSKVDEAVA 122
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 124 bits (299), Expect = 3e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
Q AVH+QGQE LT++ LA A Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 451 LHMLEHAESLKAKVDEAVA 507
L+MLE ESL++KVDEAVA
Sbjct: 589 LYMLESPESLRSKVDEAVA 607
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 124 bits (299), Expect = 3e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
Q AVH+QGQE LT++ LA A Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 451 LHMLEHAESLKAKVDEAVA 507
L+MLE ESL++KVDEAVA
Sbjct: 589 LYMLESPESLRSKVDEAVA 607
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 124 bits (299), Expect = 3e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
Q AVH+QGQE LT++ LA A Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 451 LHMLEHAESLKAKVDEAVA 507
L+MLE ESL++KVDEAVA
Sbjct: 589 LYMLESPESLRSKVDEAVA 607
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 124 bits (299), Expect = 3e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
Q AVH+QGQE LT++ LA A Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 451 LHMLEHAESLKAKVDEAVA 507
L+MLE ESL++KVDEAVA
Sbjct: 589 LYMLESPESLRSKVDEAVA 607
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 124 bits (299), Expect = 3e-28
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = +1
Query: 271 QPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 450
Q AVH+QGQE LT++ LA A Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 451 LHMLEHAESLKAKVDEAVA 507
L+MLE ESL++KVDEAVA
Sbjct: 589 LYMLESPESLRSKVDEAVA 607
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 123 bits (296), Expect = 6e-28
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 67 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 126
Query: 430 EIDNSELLHMLEHAESLKAKVDEAVA 507
EIDNSELL MLE ESL AK+DEAVA
Sbjct: 127 EIDNSELLLMLESPESLHAKIDEAVA 152
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 123 bits (296), Expect = 6e-28
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 513 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 572
Query: 430 EIDNSELLHMLEHAESLKAKVDEAVA 507
EIDNSELL MLE ESL AK+DEAVA
Sbjct: 573 EIDNSELLLMLESPESLHAKIDEAVA 598
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 123 bits (296), Expect = 6e-28
Identities = 61/86 (70%), Positives = 69/86 (80%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 513 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 572
Query: 430 EIDNSELLHMLEHAESLKAKVDEAVA 507
EIDNSELL MLE ESL AK+DEAVA
Sbjct: 573 EIDNSELLLMLESPESLHAKIDEAVA 598
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 113 bits (273), Expect = 4e-25
Identities = 56/81 (69%), Positives = 64/81 (79%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 67 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 126
Query: 430 EIDNSELLHMLEHAESLKAKV 492
EIDNSELL MLE ESL AK+
Sbjct: 127 EIDNSELLLMLESPESLHAKI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 112 bits (270), Expect = 9e-25
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 67 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 126
Query: 430 EIDNSELLHMLEHAESLKAK 489
EIDNSELL MLE ESL AK
Sbjct: 127 EIDNSELLLMLESPESLHAK 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 112 bits (270), Expect = 9e-25
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 429
H+ +PAVHI GQEPLT++MLA A L EQKQM+GERL+PLI +H LAGKITGMLL
Sbjct: 48 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLL 107
Query: 430 EIDNSELLHMLEHAESLKAK 489
EIDNSELL MLE ESL AK
Sbjct: 108 EIDNSELLLMLESPESLHAK 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 334 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 504
L +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2389 LPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2445
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 334 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 504
L +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2390 LPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2446
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 63.7 bits (148), Expect = 5e-10
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 334 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 504
L +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2412 LPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2468
>AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 134
Score = 51.2 bits (117), Expect = 3e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 250 HANPPAPQPAVHIQGQEPLTSTMLAXAXLQEQKQMLG 360
H+ +PAVHI GQEPLT++MLA A L EQKQM+G
Sbjct: 8 HSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIG 44
>DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor
protein.
Length = 111
Score = 35.1 bits (77), Expect = 0.22
Identities = 26/76 (34%), Positives = 32/76 (42%)
Frame = +2
Query: 2 RPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAA 181
RP +PR A P VRP + AS PT RP PA + + RP A
Sbjct: 34 RPASPRTPAAPTVRP-PRPASPRTPAAPTVRP--PRPAFPGVPAAPTVRPPRPASPRTPA 90
Query: 182 AASIRPPLVSXSXRPA 229
A ++RPP PA
Sbjct: 91 APTVRPPRPDSPRTPA 106
Score = 33.9 bits (74), Expect = 0.50
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 RPTTPRWNAQPPVRPSTQA---ASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGV 172
RP +PR A P VRP A A ++P + PA T+R A P T
Sbjct: 2 RPASPRTPAAPTVRPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPASPRT----- 56
Query: 173 AAAAASIRPPLVSXSXRPAYYKYTPNMP 256
AA ++RPP + PA P P
Sbjct: 57 -PAAPTVRPPRPAFPGVPAAPTVRPPRP 83
>AJ272138-1|CAC20425.1| 379|Homo sapiens G protein coupled receptor
interacting protein protein.
Length = 379
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 100 CWSVSGLHICICRC-CLCARP-YRGLCIPPWSCRS 2
C V GLH+C C C C+CAR C+ W C S
Sbjct: 5 CVHVWGLHVCECVCMCVCARECVVSACMHAWVCES 39
>AF232905-1|AAG44303.1| 379|Homo sapiens putative GPCR interacting
protein GIP protein.
Length = 379
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 100 CWSVSGLHICICRC-CLCARP-YRGLCIPPWSCRS 2
C V GLH+C C C C+CAR C+ W C S
Sbjct: 5 CVHVWGLHVCECVCMCVCARECVVSACMHAWVCES 39
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 34.3 bits (75), Expect = 0.38
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + MH D A K + G +L
Sbjct: 810 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 869
Query: 427 LEIDN 441
L+IDN
Sbjct: 870 LDIDN 874
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.38
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + MH D A K + G +L
Sbjct: 343 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 402
Query: 427 LEIDN 441
L+IDN
Sbjct: 403 LDIDN 407
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 34.3 bits (75), Expect = 0.38
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + MH D A K + G +L
Sbjct: 537 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 596
Query: 427 LEIDN 441
L+IDN
Sbjct: 597 LDIDN 601
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 34.3 bits (75), Expect = 0.38
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + MH D A K + G +L
Sbjct: 655 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 714
Query: 427 LEIDN 441
L+IDN
Sbjct: 715 LDIDN 719
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 34.3 bits (75), Expect = 0.38
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + MH D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 791
Query: 427 LEIDN 441
L+IDN
Sbjct: 792 LDIDN 796
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 259 PPAPQP-AVHIQGQEPLTSTM-LAXAXLQEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 426
PP PQP VH G LT+T A + + + E + +H D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEVHSDSASKDVPGRIL 791
Query: 427 LEIDN 441
L+IDN
Sbjct: 792 LDIDN 796
>BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein
protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 29 QPPVRPSTQAASAYANMQPTY-RPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
QP V+P AA+ A +P +P A T+R + +P T + VAA A++RPP
Sbjct: 283 QPSVKP---AAAKPAPAKPVAAKPVATKTA--TVRPPVAVKPATAAKPVAAKPAAVRPP- 336
Query: 206 VSXSXRPAYYKYTPNMPTHQ 265
+ + +P K P +P Q
Sbjct: 337 AAAAAKPVATK--PEVPRPQ 354
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 148 SCT*RCSY-CRLGRXXXCWSVSGLHICICRCCLCARPYRGLCIPPWSC 8
+C C++ C C V G H+C+C CLC + +C+ +C
Sbjct: 102 ACVCGCTFVCVCACVCGCLCVCGAHLCVC-VCLCVGAHLCVCLCVCAC 148
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 29 QPPVRPSTQAASAYANMQPTY-RPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
QP V+P AA+ A +P +P A T+R + +P T + VAA A++RPP
Sbjct: 1427 QPSVKP---AAAKPAPAKPVAAKPVATKTA--TVRPPVAVKPATAAKPVAAKPAAVRPP- 1480
Query: 206 VSXSXRPAYYKYTPNMPTHQ 265
+ + +P K P +P Q
Sbjct: 1481 AAAAAKPVATK--PEVPRPQ 1498
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 29 QPPVRPSTQAASAYANMQPTY-RPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
QP V+P AA+ A +P +P A T+R + +P T + VAA A++RPP
Sbjct: 704 QPSVKP---AAAKPAPAKPVAAKPVATKMA--TVRPPVAVKPATAAKPVAAKPAAVRPP- 757
Query: 206 VSXSXRPAYYKYTPNMPTHQ 265
+ + +P K P +P Q
Sbjct: 758 AAAAAKPVATK--PEVPRPQ 775
>AY515311-1|AAS87212.1| 924|Homo sapiens sONE protein.
Length = 924
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGAR 148
P TP AQP + P++ + S ++ P PA P+Q + S G R
Sbjct: 94 PATPPTQAQPAMTPASASPSWGSHSTPPLAPATPTPSQQCPQDSPGLR 141
>AK096734-1|BAC04853.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ39415 fis, clone PLACE6016160. ).
Length = 340
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGAR 148
P TP AQP + P++ + S ++ P PA P+Q + S G R
Sbjct: 94 PATPPTQAQPAMTPASASPSWGSHSTPPLAPATPTPSQQCPQDSPGLR 141
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 31.5 bits (68), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 76 ICICRCCLCARPYRGLCIPPWSC 8
+C+CR CLC Y +C+P C
Sbjct: 8 VCMCRWCLCVCIYMCVCVPVCMC 30
>AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein.
Length = 588
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 29 QPPVRPSTQAASAYANMQPTY-RPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
QP V+P AA+ A +P +P A T+R + +P T + VAA A++RPP
Sbjct: 313 QPSVKP---AAAKPAPAKPVAAKPVATKMA--TVRPPVAVKPATAAKPVAAKPAAVRPP- 366
Query: 206 VSXSXRPAYYKYTPNMPTHQ 265
+ + +P K P +P Q
Sbjct: 367 AAAAAKPVATK--PEVPRPQ 384
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 31.1 bits (67), Expect = 3.5
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 29 QPPVRPSTQAASAYANMQPTY-RPAXXXPAQSTIRTSLGARPITGQQGVAAAAASIRPPL 205
QP V+P AA+ A +P +P A T+R + +P T + VAA A++RPP
Sbjct: 2902 QPSVKP---AAAKPAPAKPVAAKPVATKTA--TVRPPVAVKPATAAKPVAAKPAAVRPP- 2955
Query: 206 VSXSXRPAYYKYTPNMPTHQ 265
+ + +P K P +P Q
Sbjct: 2956 -AAAAKPVATK--PEVPRPQ 2972
>U13660-1|AAA57007.1| 501|Homo sapiens cartilage-derived
morphogenetic protein 1 precursor protein.
Length = 501
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 137 LGARPITGQQGVAAAAASIRPPLVSXSXRPAYYKY 241
LG RP + G+A A A RPPL RP + Y
Sbjct: 31 LGQRPQGSRPGLAKAEAKERPPLARNVFRPGGHSY 65
>AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ46362 fis, clone TESTI4050293. ).
Length = 679
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 343 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 480
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ43950 fis, clone TESTI4015293. ).
Length = 679
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 343 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 480
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein.
Length = 1174
Score = 30.7 bits (66), Expect = 4.7
Identities = 26/85 (30%), Positives = 35/85 (41%)
Frame = +2
Query: 5 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAXXXPAQSTIRTSLGARPITGQQGVAAAA 184
PT+P PP P++ AA+ +PT PA P + A P T ++ + AA
Sbjct: 773 PTSPAAAVPPPEEPTSPAAAVPTPEEPT-SPAAAVPTPEEPTSPAAAVP-TPEEPTSPAA 830
Query: 185 ASIRPPLVSXSXRPAYYKYTPNMPT 259
A P PA TP PT
Sbjct: 831 A---VPTPEEPTSPAAAVPTPEEPT 852
>X80915-1|CAA56874.1| 501|Homo sapiens Gdf5 protein.
Length = 501
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 137 LGARPITGQQGVAAAAASIRPPLVSXSXRPAYYKY 241
LG RP + G+A A A RPPL RP + Y
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSY 65
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
>X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur keratin
protein protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
>BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
>BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
>BC032495-1|AAH32495.1| 501|Homo sapiens GDF5 protein protein.
Length = 501
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 137 LGARPITGQQGVAAAAASIRPPLVSXSXRPAYYKY 241
LG RP + G+A A A RPPL RP + Y
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSY 65
>AL121586-3|CAB89416.1| 501|Homo sapiens growth differentiation
factor 5 (cartilage-derived morphogenetic protein-1)
protein.
Length = 501
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 137 LGARPITGQQGVAAAAASIRPPLVSXSXRPAYYKY 241
LG RP + G+A A A RPPL RP + Y
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSY 65
>AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer keratin
protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
>AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated protein
protein.
Length = 169
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 151 GSCT*RCSYCRLGRXXXCWSVSGLHICICRCCLCARPYRGLC 26
GSC CS C + C S G C C CC +PY C
Sbjct: 73 GSCG--CSQCSCCKPCCCSSGCGSSCCQCSCC---KPYCSQC 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,538,182
Number of Sequences: 237096
Number of extensions: 1570616
Number of successful extensions: 4687
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 4442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4669
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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