Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0685
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      27   0.44 
L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     27   0.78 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   1.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    26   1.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.2  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.2  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 501 GEAYIQQWRDRLMMIRIFTFSTNVHFLSEITIVNTV 394
           GE ++ +WRD  + ++IF  +    +  E  I  TV
Sbjct: 271 GEVWLAKWRDEKVAVKIFFTTEESSWFRETEIYQTV 306


>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 359 LKNNFQLFIGHVTVLTIVISLKKCTLVENVKMRI 460
           L+   Q+F+  +T  TI + ++    +ENVK +I
Sbjct: 73  LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 106



 Score = 26.6 bits (56), Expect = 0.78
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 359 LKNNFQLFIGHVTVLTIVISLKKCTLVENVKMRI 460
           L+   Q+F+  +T  TI + ++    +ENVK +I
Sbjct: 149 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 374 QLFIGHVTVLTIVISLKKCTLVENVKMRI 460
           Q+F+  +T  TI + ++    +ENVK +I
Sbjct: 2   QIFVKTLTGKTITLEVEPSDTIENVKAKI 30


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 537 HPIFPSISPQVIGPTGRGTPNAALTGTRSPVQNTSA--SSAIGSMTRMSGPLPFQ 695
           HP  PS+ P    P   G     L+  +SP  +++A  +S   S+   +   PF+
Sbjct: 73  HPSVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSPFR 127


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 537 HPIFPSISPQVIGPTGRGTPNAALTGTRSPVQNTSA--SSAIGSMTRMSGPLPFQ 695
           HP  PS+ P    P   G     L+  +SP  +++A  +S   S+   +   PF+
Sbjct: 73  HPSVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAAALNSGFPSIANPNPRSPFR 127


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 530 RSASNLSQHIAASHRSNGQGDAQRCAYRYAVSSP 631
           ++ S + QH+A +   NG G A   A      +P
Sbjct: 379 KTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAP 412


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 530 RSASNLSQHIAASHRSNGQGDAQRCAYRYAVSSP 631
           ++ S + QH+A +   NG G A   A      +P
Sbjct: 379 KTVSQIGQHVAGTGSLNGSGSATNGASNGGSGAP 412


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 583 PVGPMTCGDMLGKIGCGTRR 524
           P   + CGD  G  GC  RR
Sbjct: 121 PFDRVVCGDFAGPNGCPRRR 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,857
Number of Sequences: 2352
Number of extensions: 15506
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)