Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0685
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007122-1|AAH07122.1|  307|Homo sapiens SEC22 vesicle trafficki...    33   1.4  
BC051728-1|AAH51728.1|  737|Homo sapiens suppressor of hairy win...    30   7.3  
AL139234-5|CAI42782.1|  737|Homo sapiens suppressor of hairy win...    30   7.3  
AL133204-1|CAB61579.1|  610|Homo sapiens hypothetical protein pr...    30   7.3  
AL023799-2|CAI42593.1|  737|Homo sapiens suppressor of hairy win...    30   7.3  
AL023799-1|CAI42592.1|  610|Homo sapiens suppressor of hairy win...    30   7.3  

>BC007122-1|AAH07122.1|  307|Homo sapiens SEC22 vesicle trafficking
           protein homolog A (S. cerevisiae) protein.
          Length = 307

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 305 KRFINKTILYVCNLYLNSLKNNFQLFIGHVTV 400
           K F+   ++ +CN+YL  L+N +QLF  HVTV
Sbjct: 255 KSFLTFGLICLCNMYLYELRNLWQLFF-HVTV 285


>BC051728-1|AAH51728.1|  737|Homo sapiens suppressor of hairy wing
           homolog 3 (Drosophila) protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 502 RRGLHPAVERQA---DDDSHFYIFN*CTFFKRNNNRQYSYV 389
           RRG+H  +E  +   D  SHF I+  C+F K N N   ++V
Sbjct: 615 RRGIHKCIECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFV 655


>AL139234-5|CAI42782.1|  737|Homo sapiens suppressor of hairy wing
           homolog 3 (Drosophila) protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 502 RRGLHPAVERQA---DDDSHFYIFN*CTFFKRNNNRQYSYV 389
           RRG+H  +E  +   D  SHF I+  C+F K N N   ++V
Sbjct: 615 RRGIHKCIECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFV 655


>AL133204-1|CAB61579.1|  610|Homo sapiens hypothetical protein
           protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 502 RRGLHPAVERQA---DDDSHFYIFN*CTFFKRNNNRQYSYV 389
           RRG+H  +E  +   D  SHF I+  C+F K N N   ++V
Sbjct: 566 RRGIHKCIECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFV 606


>AL023799-2|CAI42593.1|  737|Homo sapiens suppressor of hairy wing
           homolog 3 (Drosophila) protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 502 RRGLHPAVERQA---DDDSHFYIFN*CTFFKRNNNRQYSYV 389
           RRG+H  +E  +   D  SHF I+  C+F K N N   ++V
Sbjct: 615 RRGIHKCIECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFV 655


>AL023799-1|CAI42592.1|  610|Homo sapiens suppressor of hairy wing
           homolog 3 (Drosophila) protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 502 RRGLHPAVERQA---DDDSHFYIFN*CTFFKRNNNRQYSYV 389
           RRG+H  +E  +   D  SHF I+  C+F K N N   ++V
Sbjct: 566 RRGIHKCIECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFV 606


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,922,965
Number of Sequences: 237096
Number of extensions: 2124891
Number of successful extensions: 16991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16991
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)