Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0684
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 589 YWTIGTXGKGDLG 627
           Y ++GT G+GDLG
Sbjct: 101 YGSVGTLGRGDLG 113


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 294 NLPYAYGELQFFRYTW 247
           N P  Y + +  RYTW
Sbjct: 31  NFPNFYNDFEVQRYTW 46


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 117 ITLLIFSDRARYSDTATTISHACTE 43
           I +LI S ++RY D    +  AC +
Sbjct: 189 INILIRSFKSRYKDLNQKLETACEQ 213


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 484 LKSHNIRRNIYY 449
           LK   IR+N+YY
Sbjct: 90  LKGRKIRKNLYY 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,158
Number of Sequences: 336
Number of extensions: 2812
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)