Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0683
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.97 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   1.7  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   1.7  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   1.7  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   5.2  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   5.2  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 33   LRRITELREKRKKDKIESIRRKQYTERMRALRVMADLHYERYLMV 167
            L  IT  R + ++   + +R+K++TE MR   ++     E Y M+
Sbjct: 1106 LEEITAKRNEMRQ-LYDDVRKKRFTEFMRGFHIITKKLKEMYQMI 1149


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 428 YYVTNFMFRKFKEGINVLRKEFEIKVQELMHTMKG 532
           YY+T  + RK +EG+ V R+EF   V+EL   + G
Sbjct: 493 YYLTELL-RK-EEGVTVTREEFLQAVRELNPYVNG 525


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 428 YYVTNFMFRKFKEGINVLRKEFEIKVQELMHTMKG 532
           YY+T  + RK +EG+ V R+EF   V+EL   + G
Sbjct: 493 YYLTELL-RK-EEGVTVTREEFLQAVRELNPYVNG 525


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 428 YYVTNFMFRKFKEGINVLRKEFEIKVQELMHTMKG 532
           YY+T  + RK +EG+ V R+EF   V+EL   + G
Sbjct: 379 YYLTELL-RK-EEGVTVTREEFLQAVRELNPYVNG 411


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 YTERMRALRVMADLHYERYLMVNYAIRP 185
           Y  R+R+L   ADL  E++ ++ Y   P
Sbjct: 345 YWVRLRSLGPCADLQLEQFAVLRYTTGP 372


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 329  FYRKKVLRKYFEGFKKNHYEFVLKMQVAVDYYDYYVTN 442
            +Y+    R  F       ++  LK    V  YDYY TN
Sbjct: 1274 YYKMGTERNCFTVTAYRRFKVALKRPAYVVVYDYYNTN 1311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,123
Number of Sequences: 2352
Number of extensions: 11742
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)