Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0682
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -3

Query: 564 NNFPLKRKSKIHYIYFKRYLYHVRT 490
           +NF +  ++  + +YF R ++H+ +
Sbjct: 322 SNFEIGFENYYNILYFSRIMFHINS 346


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +1

Query: 349 SGITVVMVKTVIFIGIFKRLQYNSK*HQKSILCLTI 456
           SG+  ++    + I  F   QY +K +   I+ +T+
Sbjct: 149 SGLVTIVATLTVTIIFFASYQYGTKTYSLFIVFMTV 184


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 546  RKSKIHYIYFKRYLYHVRTETIIT 475
            +K K   +   RY+Y+    TIIT
Sbjct: 1204 KKKKFQRMVVARYVYYATIFTIIT 1227


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +1

Query: 349 SGITVVMVKTVIFIGIFKRLQYNSK*HQKSILCLTI 456
           SG+  ++    + I  F   QY +K +   I+ +T+
Sbjct: 149 SGLVTIVATLTVTIIFFASYQYGTKTYSLFIVFMTV 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,085
Number of Sequences: 336
Number of extensions: 3845
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)