Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0680
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    68   6e-14
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    67   1e-13
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    27   0.15 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 68.1 bits (159), Expect = 6e-14
 Identities = 31/65 (47%), Positives = 44/65 (67%)
 Frame = +1

Query: 52  EEQRLTYFTEDIGMNAYYYYFHSHLPFWWTSEKYGALKERRGEVYFYFYQQLLARYYFER 231
           EE RL YF ED+G+N +++++H   PF    E     K RRGE+++Y +QQ++ARY FER
Sbjct: 190 EEHRLAYFREDLGINLHHWHWHLVYPFEAAREVVA--KNRRGELFYYMHQQIIARYNFER 247

Query: 232 LTNGL 246
           L N L
Sbjct: 248 LCNKL 252


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 67.3 bits (157), Expect = 1e-13
 Identities = 29/69 (42%), Positives = 47/69 (68%)
 Frame = +1

Query: 49  NEEQRLTYFTEDIGMNAYYYYFHSHLPFWWTSEKYGALKERRGEVYFYFYQQLLARYYFE 228
           +EE R+ Y+ EDIG+N +++++H   PF    E     K RRGE+++Y +QQ++AR+  E
Sbjct: 189 DEEHRVAYWREDIGLNLHHWHWHLVYPFEGAREIVD--KNRRGEIFYYMHQQIIARFNIE 246

Query: 229 RLTNGLGKI 255
           RL NGL ++
Sbjct: 247 RLCNGLKRV 255


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 70  YFTEDIGMNAYYYYFHSHLPFWWTSEKYGALKERRGEVYFYFYQQLLARY 219
           +F   +  N  +  FH++  F WT     A  E+    +F FY Q +  +
Sbjct: 110 WFLPFVVTNIIFVLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYF 159


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 518 DLHFLPVVADEVNGFRV 468
           DL   PVV ++VNG R+
Sbjct: 186 DLEDQPVVYNDVNGVRI 202


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 268 HENSGSYQVHW*DAQSSNEPIIAG 197
           H +S S  +HW      N P + G
Sbjct: 125 HLSSDSTTIHWHGHHQKNSPYMDG 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,188
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)