Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0679
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical...    27   9.4  

>AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical
           protein Y26D4A.10 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 293 LASSTRCYSLHYSQ*N*ITISLNHLHVDCRQRLAD 189
           +ASST+CY L  S+ N + I  N + V  RQ  AD
Sbjct: 388 IASSTKCYCLVMSE-NIVEIKDNRIKVISRQNEAD 421


>AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.21 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 71  EYLMSTVVLWRDAEIFR*TFHSIYWIVCCKIFRNIRESMGPR 196
           +YL + V+ W+  + F+   H    + C  + R IRES   R
Sbjct: 256 KYLANLVLPWQKEKNFKRAIHQFQRLNCQSLGREIRESASRR 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,196
Number of Sequences: 27780
Number of extensions: 296953
Number of successful extensions: 687
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)