Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0678
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 190 3e-47
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 128 2e-28
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 125 1e-27
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 124 2e-27
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 124 3e-27
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 121 2e-26
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 116 7e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 109 4e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 109 8e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 103 4e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 102 7e-21
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 101 1e-20
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 101 1e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 101 2e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 101 2e-20
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 100 3e-20
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 99 1e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 95 1e-18
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 94 2e-18
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 91 2e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 91 3e-17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 91 3e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 90 5e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 84 3e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 83 4e-15
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 83 4e-15
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 82 1e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 1e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 79 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 78 2e-13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 77 4e-13
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 77 5e-13
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 76 9e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 1e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 75 2e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 4e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 73 5e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 6e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 6e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 73 6e-12
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 73 8e-12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 72 1e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 72 1e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 71 2e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 71 3e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 70 6e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 1e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 68 2e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 4e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 67 4e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 4e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 67 4e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 7e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 66 9e-10
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 65 2e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 65 2e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 65 2e-09
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 64 2e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 4e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 64 4e-09
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 64 4e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 63 5e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 63 7e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 63 7e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 9e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 2e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 62 2e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 62 2e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 61 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 61 3e-08
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 60 4e-08
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 60 5e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 60 5e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 6e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 59 1e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 58 3e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 57 3e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 56 8e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 56 8e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 56 8e-07
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 56 1e-06
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 54 3e-06
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 52 9e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 52 1e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 51 3e-05
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 50 7e-05
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 48 3e-04
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 46 0.001
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 45 0.001
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 44 0.004
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 44 0.004
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 42 0.013
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 41 0.031
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.38
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 37 0.50
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 36 0.88
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 36 0.88
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.2
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 35 1.5
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.0
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.0
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 34 2.7
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.5
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 33 4.7
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.2
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.2
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 8.2
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 8.2
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 190 bits (462), Expect = 3e-47
Identities = 89/129 (68%), Positives = 97/129 (75%)
Frame = +2
Query: 257 IIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCY 436
IIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY
Sbjct: 11 IIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCY 70
Query: 437 TSNWVIRIYCLSSSYIHCRYRY*YRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 616
SNW+I IYCLSSSYI+ Y Y YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+
Sbjct: 71 ISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYSPS 130
Query: 617 IL*RLGLYF 643
IL LG F
Sbjct: 131 ILWSLGFVF 139
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 128 bits (308), Expect = 2e-28
Identities = 58/93 (62%), Positives = 67/93 (72%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ + TSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETF 252
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV AHH+FT+G+D+DT
Sbjct: 253 GMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDT 285
Score = 59.3 bits (137), Expect = 8e-08
Identities = 35/84 (41%), Positives = 42/84 (50%)
Frame = +1
Query: 13 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 192
+ H G SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 120 LGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILL 179
Query: 193 XXXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN+ F
Sbjct: 180 LLSLPVLAGAITMLLTDRNMNTSF 203
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +G F
Sbjct: 286 RAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIF 330
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 125 bits (301), Expect = 1e-27
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPF 268
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV AHH+FTVG+D+DT
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDT 301
Score = 64.1 bits (149), Expect = 3e-09
Identities = 39/85 (45%), Positives = 43/85 (50%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N+AH G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 135 NLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVL 194
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
A IT+LLTDRNL F
Sbjct: 195 LLLSLPVLAAGITMLLTDRNLNTTF 219
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LG F
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIF 346
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 124 bits (299), Expect = 2e-27
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPF 268
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV AHH+FTVG+D+DT
Sbjct: 269 GYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDT 301
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N +H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 135 NYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVL 194
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
A IT+LLTDRNL F
Sbjct: 195 LLLSLPVLAAGITMLLTDRNLNTTF 219
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LG F
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIF 346
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 124 bits (298), Expect = 3e-27
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 268
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV AHH+FTVG+D+DT
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDT 301
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/85 (43%), Positives = 43/85 (50%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N+AH G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 135 NLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVL 194
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
A IT+LLTDRNL F
Sbjct: 195 LLLSLPVLAAGITMLLTDRNLNTTF 219
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LG F
Sbjct: 302 RAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIF 346
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 121 bits (291), Expect = 2e-26
Identities = 56/103 (54%), Positives = 68/103 (66%)
Frame = +3
Query: 201 TTCFSWSYYNIINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 380
++ SW N S T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 381 SQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
+ GK+E F F+V AHH+FTVG+D+DT
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDT 278
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LG F
Sbjct: 279 RAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVF 323
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 116 bits (278), Expect = 7e-25
Identities = 55/93 (59%), Positives = 63/93 (67%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 212 LLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVF 270
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V AHH+FTVG+D+DT
Sbjct: 271 GYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDT 303
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/83 (43%), Positives = 45/83 (54%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 140 SHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLL 199
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN F
Sbjct: 200 LSLPVLAGAITMLLTDRNFNTTF 222
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +G F
Sbjct: 304 RAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIF 348
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 109 bits (263), Expect = 4e-23
Identities = 52/93 (55%), Positives = 62/93 (66%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ TSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 217 LLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVF 275
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV AHH++TVG+D+DT
Sbjct: 276 GYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDT 308
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G +VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 145 SHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLL 204
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN F
Sbjct: 205 LAVPVLAGAITMLLTDRNFNTSF 227
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFT+AT+IIAVPTGIKIF +ATI I+ +L +G F
Sbjct: 309 RAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIF 353
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 109 bits (261), Expect = 8e-23
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ TSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVF 267
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V +HH++ VG+D+DT
Sbjct: 268 GYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDT 300
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 137 SHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLL 196
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN F
Sbjct: 197 LSLPVLAGAITMLLTDRNFNTSF 219
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
RAYFT+AT+IIAVPTGIKIF LAT++G + +L LG
Sbjct: 301 RAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALG 342
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 103 bits (247), Expect = 4e-21
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ TSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 210 VLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVF 268
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V +HH++TVG+D+DT
Sbjct: 269 GYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDT 301
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LG F
Sbjct: 302 RAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVF 346
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/83 (40%), Positives = 39/83 (46%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 138 SHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLL 197
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
AG IT++LTDRN F
Sbjct: 198 LSLPVLAGGITMVLTDRNFNTSF 220
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 102 bits (245), Expect = 7e-21
Identities = 49/86 (56%), Positives = 57/86 (66%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 221 TSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAA 279
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDTE 512
FIV AHH++T GID T+
Sbjct: 280 MLMIGLIGFIVWAHHMYTSGIDTSTK 305
Score = 53.2 bits (122), Expect = 5e-06
Identities = 32/83 (38%), Positives = 37/83 (44%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 141 SHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVI 200
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
A AIT+LL DRN F
Sbjct: 201 VAIPVLAAAITLLLFDRNFNTSF 223
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNP 613
+AYFT+AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 305 KAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTP 340
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 101 bits (243), Expect = 1e-20
Identities = 49/93 (52%), Positives = 60/93 (64%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L TSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 236 LLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVF 294
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
FIV +HH++TVG+D+DT
Sbjct: 295 GYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDT 327
Score = 50.8 bits (116), Expect = 3e-05
Identities = 33/83 (39%), Positives = 37/83 (44%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H VDL IF LHL+GISS +L LF AV ITA
Sbjct: 164 SHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLL 223
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
A AIT+LLTDRNL F
Sbjct: 224 LSLPVLAAAITMLLTDRNLNTSF 246
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
RAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LG
Sbjct: 328 RAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALG 369
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 101 bits (243), Expect = 1e-20
Identities = 47/85 (55%), Positives = 58/85 (68%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 218 TSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYA 276
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V +HH++ VG+D DT
Sbjct: 277 MASIGLLGFLVWSHHMYIVGLDADT 301
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/83 (39%), Positives = 40/83 (48%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
AH G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 138 AHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLL 197
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
+ IT+LL DRN F
Sbjct: 198 LSLPVLSAGITMLLLDRNFNTSF 220
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 616
RAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 101 bits (242), Expect = 2e-20
Identities = 46/85 (54%), Positives = 54/85 (63%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F
Sbjct: 220 TSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWA 279
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V HH+F G+DIDT
Sbjct: 280 SMGIAWMGFLVWGHHMFVAGLDIDT 304
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHG 592
RAYFT+AT++IAVPTG+K+F LATI G
Sbjct: 305 RAYFTAATLMIAVPTGVKVFNWLATIFG 332
Score = 34.3 bits (75), Expect = 2.7
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 25 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXX 201
G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 142 GLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTS 201
Query: 202 XXXXAGAITILLTDRNLKHHF 264
A +T+LL DR+ F
Sbjct: 202 VPVLAAGLTLLLLDRHFSTSF 222
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 101 bits (241), Expect = 2e-20
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 65.3 bits (152), Expect = 1e-09
Identities = 41/85 (48%), Positives = 44/85 (51%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N+AH G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 136 NLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVL 195
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
A IT+LLTDRNL F
Sbjct: 196 LLLSLPVLAAGITMLLTDRNLNTTF 220
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 100 bits (240), Expect = 3e-20
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 218 TSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYA 276
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V +HH++ VG+D DT
Sbjct: 277 MASIGLLGFLVWSHHMYIVGLDADT 301
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/83 (42%), Positives = 40/83 (48%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
AH G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 138 AHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLL 197
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
+ IT+LL DRN F
Sbjct: 198 LSLPVLSAGITMLLMDRNFNTSF 220
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQI 601
RAYFTSAT+IIA+PTGIKIF LATI+G I
Sbjct: 302 RAYFTSATMIIAIPTGIKIFSWLATIYGGSI 332
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYA 381
Query: 435 XXXXXXXXFIV*AHHIFTVGIDI 503
F+V AHH++TVG+ +
Sbjct: 382 LVAIGGLGFVVWAHHMYTVGMTL 404
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +1
Query: 28 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 207
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 247 RAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLP 306
Query: 208 XXAGAITILLTDRN 249
AGAIT+LLTDRN
Sbjct: 307 VLAGAITMLLTDRN 320
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
+AYF AT++IAVPTGIKIF +AT+ I++ ++ LG F
Sbjct: 407 QAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIF 451
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 260 TTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYA 318
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDTE 512
F+V AHH+FT G+ ++ +
Sbjct: 319 MVAIGVVGFVVWAHHMFTTGMSVNVK 344
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +1
Query: 25 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 204
G +VD+AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 183 GPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLAL 242
Query: 205 XXXAGAITILLTDRN 249
A AIT+LLTDRN
Sbjct: 243 PVLAAAITMLLTDRN 257
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
+ YFT+AT++IAVPTGIKIF +ATI G I++ ++ LG F
Sbjct: 344 KMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIF 388
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/82 (51%), Positives = 51/82 (62%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 307 TAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICA 366
Query: 435 XXXXXXXXFIV*AHHIFTVGID 500
+V HH+F VG D
Sbjct: 367 MASIVCLGSVVWGHHMFMVGFD 388
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 235 TSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYA 293
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
F V +HH+FTVG+D D+
Sbjct: 294 MASIGFLGFCVWSHHMFTVGLDADS 318
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 155 SHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLII 214
Query: 196 XXXXXXAGAITILLTDRNLKHHFLIL 273
A +T+LL DRN F ++
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVV 240
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
RAYF+ A++IIA+PTG KIF LATI+G + + +L +G
Sbjct: 319 RAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVG 360
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 235 TSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYA 293
Query: 435 XXXXXXXXFIV*AHHIFTVGIDID 506
F V +HH+FTVG+D D
Sbjct: 294 MASIGFLGFCVWSHHMFTVGLDAD 317
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 155 SHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLII 214
Query: 196 XXXXXXAGAITILLTDRNLKHHFLIL 273
A +T+LL DRN F ++
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/85 (50%), Positives = 52/85 (61%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS + F
Sbjct: 223 TLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILA 281
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
+V HH++T G+++DT
Sbjct: 282 MGCIAVLGSLVWVHHMYTTGLEVDT 306
Score = 37.9 bits (84), Expect = 0.22
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LAT 583
RAYFTS TI+I++PTG K+F + T
Sbjct: 307 RAYFTSTTILISIPTGTKVFNWICT 331
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 89.8 bits (213), Expect = 5e-17
Identities = 65/154 (42%), Positives = 68/154 (44%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
NIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 132 NIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFL 191
Query: 190 XXXXXXXXAGAITILLTDRNLKHHFLILLEEETQFYINIXXXXXXXXXXXXXXXQDLV*F 369
AGAIT+LLTDRNL F QDLV F
Sbjct: 192 LLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSF 251
Query: 370 LILFHXXXXXXXXXXXXXXFMLY*QLGY*DLLFE 471
+LF FM L Y DLLFE
Sbjct: 252 HMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFE 285
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ L TSFFDPAGGGDPILYQHLF FFGHP++ + H++ ++ +K
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDL-VSFHMLFPKKVEKSKL 264
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGID-IDTEHIXXXXXXXXXXXXXXKFLDD*LQY 587
++ ++ + E + KFL D +
Sbjct: 265 LVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDWQPF 324
Query: 588 MELKLIITLIFYED-*VCIFIHS 653
MELKLI+ L FYED +C ++ S
Sbjct: 325 MELKLIMVLQFYEDWDLCFYLQS 347
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 83.8 bits (198), Expect = 3e-15
Identities = 47/85 (55%), Positives = 50/85 (58%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
NIAH G SVDLAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 108 NIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALL 167
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRNL F
Sbjct: 168 LLLSLPVLAGAITMLLTDRNLNTSF 192
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 347
++ L TSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 227 TSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFA 286
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
V HH++T G+DIDT
Sbjct: 287 SIWIAVLGTSVWGHHMYTAGLDIDT 311
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 613
R YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 312 RTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQP 346
Score = 35.9 bits (79), Expect = 0.88
Identities = 22/78 (28%), Positives = 30/78 (38%)
Frame = +1
Query: 31 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 210
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 152 SLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPV 211
Query: 211 XAGAITILLTDRNLKHHF 264
AG++ LL DRN F
Sbjct: 212 LAGSLLFLLLDRNFNTSF 229
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 83.4 bits (197), Expect = 4e-15
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 398
++ TSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 235 VLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/74 (48%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +2
Query: 434 YTSNWVIRIYCLSSSYIHCRYRY*Y----RAYFTSATIIIAVPTGIKIFR*LATIHGTQI 601
Y WV R Y L+ +H Y RAYFT+AT+IIAVPTGIKIF LAT +G I
Sbjct: 334 YNFVWVNRKYLLT--ILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSI 391
Query: 602 NYNPNIL*RLGLYF 643
P +L LG F
Sbjct: 392 KMTPVMLFSLGFVF 405
Score = 35.9 bits (79), Expect = 0.88
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISS 78
+H G SVDLAIF+LHL+G+SS
Sbjct: 170 SHSGPSVDLAIFALHLSGVSS 190
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/65 (58%), Positives = 44/65 (67%)
Frame = +3
Query: 315 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 494
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 495 IDIDT 509
+D+DT
Sbjct: 62 MDVDT 66
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LG F
Sbjct: 67 RAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIF 111
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 220 TSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYS 278
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDT 509
V AHH+F VG+D+D+
Sbjct: 279 MILIAILGMFVWAHHMFVVGMDVDS 303
Score = 40.7 bits (91), Expect = 0.031
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 19 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 198
H + D +F++HL GISS SF LF+ A ITA
Sbjct: 141 HSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLII 200
Query: 199 XXXXXAGAITILLTDRNLKHHF 264
AG +T++L DRN F
Sbjct: 201 TLPVLAGGVTLILCDRNFNTSF 222
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYS 286
Query: 435 XXXXXXXXFIV*AHHIFTVG 494
IV AHH+FT G
Sbjct: 287 SLAISFLGLIVWAHHMFTSG 306
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
R +F + T++IAVPTGIKIF T+ G +I N +L G
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFG 353
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/93 (44%), Positives = 51/93 (54%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
I+ L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIP 251
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
+V AHH++T G+DIDT
Sbjct: 252 GELSLVLAMASIALIGSVVWAHHMYTAGLDIDT 284
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATI 586
R+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 285 RSYFTAATMIIAVPTGIKIFTWLSSL 310
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/82 (50%), Positives = 50/82 (60%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F
Sbjct: 272 TTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYS 329
Query: 435 XXXXXXXXFIV*AHHIFTVGID 500
F V AHH+FT GID
Sbjct: 330 TLAIGVLSFGVWAHHMFTTGID 351
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +3
Query: 282 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 461
GDP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F +
Sbjct: 236 GDPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGY 294
Query: 462 IV*AHHIFTVGIDIDT 509
V AHH+FTVG+DID+
Sbjct: 295 FVWAHHMFTVGLDIDS 310
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 76.6 bits (180), Expect = 5e-13
Identities = 44/85 (51%), Positives = 51/85 (60%)
Frame = -3
Query: 266 KK*CFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXX 87
KK FKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTA 74
Query: 86 XXIDEIPAKCSEKIARSTDLPLCAI 12
I+E PAKC+EKI STD P CAI
Sbjct: 75 PKIEETPAKCNEKIPMSTDAPACAI 99
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1
Query: 310 NKC*YKIGSPPPAGSKNDVLSF 245
NKC + IGSPPPAGSK +V F
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKF 21
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/60 (60%), Positives = 41/60 (68%)
Frame = +3
Query: 330 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LG F
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVF 259
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/81 (48%), Positives = 47/81 (58%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 235 TRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYS 293
Query: 435 XXXXXXXXFIV*AHHIFTVGI 497
F+V AHH+F VG+
Sbjct: 294 GVAIGFLGFLVWAHHMFAVGL 314
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +G
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIG 360
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 383
T FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 223 TMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 443 NWVIRIYCLSSSYIHCRYRY*YRAYFTSATIIIAVPTGIKIFR*LATI 586
N +R++ L +SY+H R+ Y YFT+ TI+IA+PTG KIF + T+
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/83 (44%), Positives = 48/83 (57%)
Frame = +3
Query: 249 LKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 428
L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 234 LGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVA 292
Query: 429 XXXXXXXXXXFIV*AHHIFTVGI 497
+ V AHH+F VG+
Sbjct: 293 ASSVAIVLLGYGVWAHHMFAVGL 315
Score = 37.9 bits (84), Expect = 0.22
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 515 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 619
+F +++IA+PTGIK+F AT+ G +I +N ++
Sbjct: 322 FFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSL 356
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 302 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 472
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +3
Query: 252 KTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXX 431
+T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 377 QTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIW 435
Query: 432 XXXXXXXXXFIV*AHHIFTVGID 500
++V HH++ VG+D
Sbjct: 436 AIYVMAYMGYLVWGHHMYLVGLD 458
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/88 (42%), Positives = 45/88 (51%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 243 TSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIA 301
Query: 435 XXXXXXXXFIV*AHHIFTVGIDIDTEHI 518
IV AHH+F G HI
Sbjct: 302 SFGITFLSLIVWAHHMFYTGTPNWMRHI 329
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
R F T++IA+PTG+K+F L T+ + N +L +G
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIG 368
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +3
Query: 276 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 455
GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F
Sbjct: 264 GGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGAL 322
Query: 456 XFIV*AHHIFTVGI 497
F+V AHH++ G+
Sbjct: 323 SFVVWAHHMYVSGM 336
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 479 YIHCRYRY*YRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
Y+ Y Y + +F + T+IIA+PT IK++ + T+ I+ +L LG
Sbjct: 332 YVSGMYPY-FGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALG 382
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 226 TNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFA 284
Query: 435 XXXXXXXXFIV*AHHIFTVGI 497
F+V HH+FT G+
Sbjct: 285 IVLIGFLGFMVWVHHMFTTGL 305
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 512 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 622
A F AT+ IA+PTGIKIF L TI G + Y +L
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAML 347
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LG F
Sbjct: 6 RAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVF 50
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LG F
Sbjct: 5 RAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVF 49
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/82 (47%), Positives = 49/82 (59%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 304 TSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYS 360
Query: 435 XXXXXXXXFIV*AHHIFTVGID 500
F V AHH+F G+D
Sbjct: 361 TLAIGVLSFGVWAHHMFATGLD 382
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 264 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 443
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLG 304
Query: 444 XXXXXFIV*AHHIFTVG 494
F HH+F G
Sbjct: 305 IAFVGFFAWGHHMFVSG 321
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +3
Query: 267 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXX 446
DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++ +
Sbjct: 231 DPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAI 289
Query: 447 XXXXFIV*AHHIFT 488
F V HH+FT
Sbjct: 290 ASISFAVWMHHMFT 303
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 622
R AT+ +A+P+G+K+F +AT++G +I +L
Sbjct: 311 RVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPML 348
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/80 (45%), Positives = 44/80 (55%)
Frame = +3
Query: 258 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 437
+FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 238 NFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFST 296
Query: 438 XXXXXXXFIV*AHHIFTVGI 497
F V +HH+FTVG+
Sbjct: 297 ALIGFMGFTVWSHHMFTVGM 316
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 518 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
F+ T+ IAVPTG+KIF L+T+ G QI + +L +G
Sbjct: 324 FSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIG 362
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F
Sbjct: 233 THFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMA 291
Query: 435 XXXXXXXXFIV*AHHIFTVGI 497
F + HH+F G+
Sbjct: 292 LIATGVLAFGLWVHHMFVAGL 312
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
NIAH G SVDLAIFSLH+AG+ S + ++PLFV AV ITA
Sbjct: 54 NIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAIL 113
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN+ F
Sbjct: 114 LLLSLPVLAGAITMLLTDRNINTSF 138
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGH 326
++ + TSFFDPAGGGDPILYQHLF F GH
Sbjct: 128 LLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/77 (38%), Positives = 40/77 (51%)
Frame = +3
Query: 264 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 443
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLG 297
Query: 444 XXXXXFIV*AHHIFTVG 494
F HH+FT G
Sbjct: 298 IAFVGFFTWGHHMFTSG 314
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3
Query: 279 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 458
GG P+L+QHLF F GHPEVYI+++P GI S +I+ +K F
Sbjct: 287 GGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLS 345
Query: 459 FIV*AHHIFTVGID 500
FIV AHH+F G++
Sbjct: 346 FIVWAHHMFVTGMN 359
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +3
Query: 246 KLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 425
KL +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 240 KLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGL 297
Query: 426 XXXXXXXXXXXFIV*AHHIFTVG 494
V AHH+F G
Sbjct: 298 IFATLSIGALSMAVWAHHMFVTG 320
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
++ K+ S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 219 VLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLF 277
Query: 411 XXXXXXXXXXXXXXXXFIV*AHHIFTVG 494
+V AHH+FTVG
Sbjct: 278 GYRQMVWAQMGIVVLGTMVWAHHMFTVG 305
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.1 bits (154), Expect = 7e-10
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = +3
Query: 270 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 449
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 450 XXXFIV*AHHIFTVGID 500
++V HH+F G++
Sbjct: 329 FLSYVVWGHHMFVSGMN 345
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 410
T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 215 TPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 521 TSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL 622
++ T+ IA+P+G+K+ AT++G +I Y P IL
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTIL 338
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/78 (43%), Positives = 43/78 (55%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 259 FFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSII 317
Query: 441 XXXXXXFIV*AHHIFTVG 494
F+V HH FT+G
Sbjct: 318 AISVLSFLVWTHHFFTMG 335
Score = 32.7 bits (71), Expect = 8.2
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +2
Query: 512 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 622
++F+ T+ I++PTG+KIF L T++ +I++ +L
Sbjct: 342 SFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPML 378
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/85 (48%), Positives = 43/85 (50%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N+AH G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 124 NLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVL 183
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
A IT+LLTDRNL F
Sbjct: 184 LLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +3
Query: 249 LKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 428
L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II ++ F
Sbjct: 171 LGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMV 229
Query: 429 XXXXXXXXXXFIV*AHHIFTVGI 497
F + HH+F G+
Sbjct: 230 FAVWAITAVSFFLWIHHMFVSGV 252
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
R F+ T++IAVPTGIKIF + T++ I++ +L LG F
Sbjct: 257 RVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVF 301
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 261 FFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVV 319
Query: 441 XXXXXXFIV*AHHIFTVGIDI 503
F + AHH+F G+ I
Sbjct: 320 TMSFLSFGLWAHHMFATGLPI 340
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/79 (45%), Positives = 44/79 (55%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 76 SIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVL 135
Query: 190 XXXXXXXXAGAITILLTDR 246
AGAIT+LLTDR
Sbjct: 136 LLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 137 SHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLL 196
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN F
Sbjct: 197 LSLPVLAGAITMLLTDRNFNTSF 219
Score = 46.4 bits (105), Expect = 6e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF 311
++ TSF+DPAGGGDPILYQHLF
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 245 FFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALI 303
Query: 441 XXXXXXFIV*AHHIFTVGI 497
F + HH+FT GI
Sbjct: 304 GTGFFSFGLWVHHMFTTGI 322
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +3
Query: 273 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 452
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 453 XXFIV*AHHIFTVGID 500
FIV HH+F G++
Sbjct: 331 LGFIVWGHHMFVSGMN 346
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/85 (44%), Positives = 43/85 (50%)
Frame = +1
Query: 10 NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 189
N AH G SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 118 NTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAIL 177
Query: 190 XXXXXXXXAGAITILLTDRNLKHHF 264
AGAIT+LLTDRN F
Sbjct: 178 LLLSLPVLAGAITMLLTDRNFNTSF 202
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +3
Query: 231 IINRSKLKTSFFDPAGGGDPILYQHLF 311
++ TSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +3
Query: 264 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 443
F A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++ F
Sbjct: 242 FFTAASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVA 300
Query: 444 XXXXXFIV*AHHIFTVGI 497
F + HH+FT G+
Sbjct: 301 IGFIGFGLWVHHMFTAGL 318
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +2
Query: 515 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLY 640
+FT+++ +IA+P+G++IF +AT+ G++ +L LG +
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFF 366
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 264 FFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASG 322
Query: 441 XXXXXXFIV*AHHIFTVG 494
F+V HH FT+G
Sbjct: 323 AISVLGFMVWLHHFFTMG 340
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2
Query: 512 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
A+F AT+II++PTG+K+F L TI+ ++ + IL LG
Sbjct: 347 AFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLG 387
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 62.9 bits (146), Expect = 7e-09
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 LKTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 425
L T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 224 LGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYI 280
Query: 426 XXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
F+V HH+F G +I T
Sbjct: 281 LTAFLIATIISFVVWMHHMFITGTNIYT 308
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.5 bits (145), Expect = 9e-09
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 276 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 383
GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 304 FFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALV 362
Query: 441 XXXXXXFIV*AHHIFTVGI 497
F + HH+FT GI
Sbjct: 363 GTAFLSFGLWVHHMFTTGI 381
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = +3
Query: 204 TCFSWSYYNIINRSKLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 383
TCF + +IN + GGG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 258 TCFFYPSGLVINNAA------PTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Query: 384 QERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGID 500
+K F FIV HH+FT G++
Sbjct: 312 C-MCRKPLFGYKPMVFSMSAIASLGFIVWGHHMFTSGMN 349
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +3
Query: 279 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 458
GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 269 GGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLG 327
Query: 459 FIV*AHHIFTVG 494
F V HH FT+G
Sbjct: 328 FAVWLHHFFTMG 339
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 515 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 634
+F AT++I++PTG+K+F L TI+ ++ + I+ LG
Sbjct: 347 FFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLG 386
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/79 (41%), Positives = 40/79 (50%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAI 293
Query: 441 XXXXXXFIV*AHHIFTVGI 497
F + HH+FT GI
Sbjct: 294 SLAVLSFGLWVHHMFTTGI 312
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 261 FFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAV 319
Query: 441 XXXXXXFIV*AHHIFTVGI 497
F + HH+FT G+
Sbjct: 320 GTGFLSFGLWVHHMFTTGL 338
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
+ FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ + +K +
Sbjct: 219 SGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFA 277
Query: 435 XXXXXXXXFIV*AHHIFTVGI 497
F AHH+F G+
Sbjct: 278 FVLLTIVGFSSWAHHMFATGM 298
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/77 (45%), Positives = 42/77 (54%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
AH G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 138 AHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLL 197
Query: 196 XXXXXXAGAITILLTDR 246
AGAIT+LLTDR
Sbjct: 198 LSLPVLAGAITMLLTDR 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFG 323
T+FFDPAGGGDPILYQHLF FFG
Sbjct: 218 TTFFDPAGGGDPILYQHLFWFFG 240
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 604
RAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 267 RAYFTAATMIIAVPTGIKIFSWLATVSGSGRN 298
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/84 (38%), Positives = 42/84 (50%)
Frame = +3
Query: 246 KLKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 425
KL S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 232 KLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVM 290
Query: 426 XXXXXXXXXXXFIV*AHHIFTVGI 497
IV HH+F VGI
Sbjct: 291 VYSMLAIVLVSCIVWLHHMFAVGI 314
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 518 FTSATIIIAVPTGIKIFR*LATIHGTQI 601
F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRI 349
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 60.1 bits (139), Expect = 5e-08
Identities = 35/82 (42%), Positives = 41/82 (50%)
Frame = +3
Query: 249 LKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 428
L T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 254 LSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLI 312
Query: 429 XXXXXXXXXXFIV*AHHIFTVG 494
F+V HH FT+G
Sbjct: 313 YATISITVLSFLVWLHHFFTMG 334
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 446 WVIRIYCLSSSYIHCRYRY*YRAYFTSATIIIAVPTGIKIFR*LATI 586
W+ + + S Y+ +F+ +T+IIA+PTG+KIF + TI
Sbjct: 326 WLHHFFTMGSGYLS-------NIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 59.7 bits (138), Expect = 6e-08
Identities = 32/79 (40%), Positives = 39/79 (49%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAV 293
Query: 441 XXXXXXFIV*AHHIFTVGI 497
F + HH+FT GI
Sbjct: 294 ALGVLSFGLWVHHMFTTGI 312
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/78 (41%), Positives = 40/78 (51%)
Frame = +3
Query: 261 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 440
FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 283 FFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATI 341
Query: 441 XXXXXXFIV*AHHIFTVG 494
F+V HH FT+G
Sbjct: 342 SIAFLSFLVWLHHFFTMG 359
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/65 (43%), Positives = 33/65 (50%)
Frame = +3
Query: 315 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 494
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 495 IDIDT 509
D+ T
Sbjct: 61 YDVHT 65
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/81 (37%), Positives = 40/81 (49%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 434
T FFD A GG P+L+QHLF F HP VY+++LP GI+S + ++
Sbjct: 253 THFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVS 311
Query: 435 XXXXXXXXFIV*AHHIFTVGI 497
F V HH+F GI
Sbjct: 312 TVATMLIGFEVWVHHMFATGI 332
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 56.0 bits (129), Expect = 8e-07
Identities = 32/82 (39%), Positives = 41/82 (50%)
Frame = +3
Query: 249 LKTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 428
L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 278 LGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMV 336
Query: 429 XXXXXXXXXXFIV*AHHIFTVG 494
+ V HH FT+G
Sbjct: 337 IATFAIGGISWGVWLHHFFTMG 358
Score = 37.9 bits (84), Expect = 0.22
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 515 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
+F++AT+++ +PTG+K+F T+ ++ + P +L LG F
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALF 408
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 155 SHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLII 214
Query: 196 XXXXXXAGAITILLTDRNLKHHFLIL 273
A +T+LL DRN F ++
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVV 240
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 350
TSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 235 TSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 155 SHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLII 214
Query: 196 XXXXXXAGAITILLTDRNLKHHFLIL 273
A +T+LL DRN F ++
Sbjct: 215 LALPVLAAGLTMLLMDRNFNTSFFVV 240
Score = 36.3 bits (80), Expect = 0.66
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 365
TSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 235 TSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/83 (39%), Positives = 40/83 (48%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
AH G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 138 AHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLL 197
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
+ IT+LL DRN F
Sbjct: 198 LSLPVLSAGITMLLLDRNFNTSF 220
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 350
TSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 218 TSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 643
RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LG F
Sbjct: 303 RAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIF 347
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 52.4 bits (120), Expect = 9e-06
Identities = 31/83 (37%), Positives = 39/83 (46%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
AH G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 138 AHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLL 197
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
+ +T+LL DRN F
Sbjct: 198 LTLPVLSAGVTMLLLDRNFNTSF 220
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFG 323
TSFF+ AGGGDPILY+HLF FFG
Sbjct: 218 TSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 383
T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 217 THFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 267 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXX 446
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLV 301
Query: 447 XXXXFIV*AHHIFTVGIDIDTEHI 518
F+V HH+F GI++ + I
Sbjct: 302 ALQSFVVWMHHMFLTGINLPIKTI 325
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 255 TSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 350
TSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 223 TSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/83 (33%), Positives = 37/83 (44%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G +VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 143 SHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLL 202
Query: 196 XXXXXXAGAITILLTDRNLKHHF 264
A +T+ + DRN F
Sbjct: 203 LSLPVLAAGLTMGIFDRNFNTSF 225
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 302 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 481
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 482 IHCR 493
+H R
Sbjct: 61 VHSR 64
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +1
Query: 16 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 195
+H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 137 SHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLL 196
Query: 196 XXXXXXAG 219
AG
Sbjct: 197 LSLPVLAG 204
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LAT 583
RAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 5 RAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 333 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 509
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DT
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDT 58
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIF 568
R YF+SAT++IA+PT IK+F
Sbjct: 59 RVYFSSATLLIALPTSIKVF 78
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 282 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 461
G +++++LF +FGHPEVY+L+LPG G + +S + +
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSV 313
Query: 462 IV*AHHIFTVGI 497
+V HH F GI
Sbjct: 314 MVFLHHTFMTGI 325
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +3
Query: 162 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKTSFFDPA 275
M C +YS +TC WSYYN IN SKLK F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIF 568
RAYFT+AT+IIAVPTGIKIF
Sbjct: 11 RAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LATIHGT 595
RA+FTS TI+I++PTG K+F L T T
Sbjct: 11 RAFFTSTTILISIPTGTKVFNWLCTYMST 39
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.1 bits (82), Expect = 0.38
Identities = 25/81 (30%), Positives = 30/81 (37%)
Frame = +3
Query: 258 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 437
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGL 369
Query: 438 XXXXXXXFIV*AHHIFTVGID 500
+ HH FT D
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSD 390
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 509 RAYFTSATIIIAVPTGIKIFR*LAT 583
RAYF++ TI+IA+PTG KIF L T
Sbjct: 15 RAYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 35.9 bits (79), Expect = 0.88
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +2
Query: 377 YFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCRYRY*YRAYFTSATIIIAVPTG 556
Y K FW +CY N + +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 557 IKIFR*LATIHGTQINYNPNIL 622
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 35.9 bits (79), Expect = 0.88
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +1
Query: 13 IAHRGRSVDLAIFSLHLAGISS 78
+ H G SVD AIFSLHLAG SS
Sbjct: 31 VGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 279 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 395
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 142 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLKHHFLILLEEE 285
DQ+ LF ++ IT AG IT+LL+DRN F IL+ E
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGE 59
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 327 PEVYILILPGFGIISHIISQERGKK 401
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 285 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 398
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +3
Query: 159 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKTSFFDPAGGGDP 290
CM C +Y TCFS S+Y IIN K K F P P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 291 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 398
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 13 IAHRGRSVDLAIFSLHLAGISS 78
+AH +VDL IF LHLAGISS
Sbjct: 126 LAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 25 GRSVDLAIFSLHLAGISS 78
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 245 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 123
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 305 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 478
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 479 YIH 487
+H
Sbjct: 618 NVH 620
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/76 (32%), Positives = 33/76 (43%)
Frame = +1
Query: 25 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 204
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 205 XXXAGAITILLTDRNL 252
AGAIT+LLTDRN+
Sbjct: 184 PVLAGAITMLLTDRNM 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,924,243
Number of Sequences: 1657284
Number of extensions: 8006127
Number of successful extensions: 17485
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 16079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17336
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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