Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0676
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   0.98 
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   2.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   4.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   4.0  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 609 GGDAVSSILPLSILYGRQKPVLPISTCSLNC 517
           GGDA+SSI P+S+L    K +  +    L+C
Sbjct: 512 GGDAMSSIRPISLLNTDYKLLSKVIKPRLDC 542


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 166 TVCMPADIHKTSFGLLLSLNLSYISCTPSNTHPVLYLASLSPSPESL 26
           T C P+   +    + LSL LS  SC  S +   ++L    PS E L
Sbjct: 31  TSCWPSRRSRLCI-IALSLTLSSSSCKQSTSLSFVFLCCCVPSSERL 76


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 279 PVDWSEINAAWGQTVL 326
           P+ WSE N AW  T +
Sbjct: 189 PLPWSECNDAWNATCI 204


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 279 PVDWSEINAAWGQTVL 326
           P+ WSE N AW  T +
Sbjct: 189 PLPWSECNDAWNATCI 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,231
Number of Sequences: 2352
Number of extensions: 16125
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)