Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0676
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38932-1|AAB59573.1| 301|Homo sapiens protein ( Homo sapiens GT... 140 4e-33
BC010276-1|AAH10276.1| 450|Homo sapiens beclin 1 (coiled-coil, ... 140 4e-33
AK223411-1|BAD97131.1| 450|Homo sapiens beclin 1 variant protein. 140 4e-33
AF139131-1|AAD27650.1| 450|Homo sapiens beclin 1 protein. 140 4e-33
AF077301-1|AAC68653.1| 450|Homo sapiens Bcl-2-interacting prote... 140 4e-33
AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting prote... 30 9.0
>L38932-1|AAB59573.1| 301|Homo sapiens protein ( Homo sapiens GT197
partial ORF mRNA, 3' end of cds. ).
Length = 301
Score = 140 bits (339), Expect = 4e-33
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ-K 428
FRLGRLP+ PV+W+EINAAWGQTVLLL +LA K+ FQRY+LVPYGNHSY+E L D+ K
Sbjct: 139 FRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSK 198
Query: 429 VLPLYGSGGFRFLWDTKFDAAMVAFLD 509
LPLY SGG RF WD KFD AMVAFLD
Sbjct: 199 ELPLYCSGGLRFFWDNKFDHAMVAFLD 225
Score = 84.6 bits (200), Expect = 3e-16
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 55 LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
LD+E+ Y REY+++++ + +D++K E Q+ Y Q+QL+KLKKTNVF ATFHI SGQ
Sbjct: 73 LDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQ 132
Query: 235 FGIINNF 255
FG INNF
Sbjct: 133 FGTINNF 139
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 CLQQFKEQVEMGNTGFCLPYRID--KGKIEDTASPPHAYSIKIQFNSEEHW 655
C+QQFKE+VE G T FCLPYR+D KGKIEDT +YSIK QFNSEE W
Sbjct: 226 CVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW 276
>BC010276-1|AAH10276.1| 450|Homo sapiens beclin 1 (coiled-coil,
myosin-like BCL2 interacting protein) protein.
Length = 450
Score = 140 bits (339), Expect = 4e-33
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ-K 428
FRLGRLP+ PV+W+EINAAWGQTVLLL +LA K+ FQRY+LVPYGNHSY+E L D+ K
Sbjct: 288 FRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSK 347
Query: 429 VLPLYGSGGFRFLWDTKFDAAMVAFLD 509
LPLY SGG RF WD KFD AMVAFLD
Sbjct: 348 ELPLYCSGGLRFFWDNKFDHAMVAFLD 374
Score = 84.6 bits (200), Expect = 3e-16
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 55 LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
LD+E+ Y REY+++++ + +D++K E Q+ Y Q+QL+KLKKTNVF ATFHI SGQ
Sbjct: 222 LDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQ 281
Query: 235 FGIINNF 255
FG INNF
Sbjct: 282 FGTINNF 288
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 CLQQFKEQVEMGNTGFCLPYRID--KGKIEDTASPPHAYSIKIQFNSEEHW 655
C+QQFKE+VE G T FCLPYR+D KGKIEDT +YSIK QFNSEE W
Sbjct: 375 CVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW 425
>AK223411-1|BAD97131.1| 450|Homo sapiens beclin 1 variant protein.
Length = 450
Score = 140 bits (339), Expect = 4e-33
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ-K 428
FRLGRLP+ PV+W+EINAAWGQTVLLL +LA K+ FQRY+LVPYGNHSY+E L D+ K
Sbjct: 288 FRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSK 347
Query: 429 VLPLYGSGGFRFLWDTKFDAAMVAFLD 509
LPLY SGG RF WD KFD AMVAFLD
Sbjct: 348 ELPLYCSGGLRFFWDNKFDHAMVAFLD 374
Score = 84.6 bits (200), Expect = 3e-16
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 55 LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
LD+E+ Y REY+++++ + +D++K E Q+ Y Q+QL+KLKKTNVF ATFHI SGQ
Sbjct: 222 LDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQ 281
Query: 235 FGIINNF 255
FG INNF
Sbjct: 282 FGTINNF 288
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 CLQQFKEQVEMGNTGFCLPYRID--KGKIEDTASPPHAYSIKIQFNSEEHW 655
C+QQFKE+VE G T FCLPYR+D KGKIEDT +YSIK QFNSEE W
Sbjct: 375 CVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW 425
>AF139131-1|AAD27650.1| 450|Homo sapiens beclin 1 protein.
Length = 450
Score = 140 bits (339), Expect = 4e-33
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ-K 428
FRLGRLP+ PV+W+EINAAWGQTVLLL +LA K+ FQRY+LVPYGNHSY+E L D+ K
Sbjct: 288 FRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSK 347
Query: 429 VLPLYGSGGFRFLWDTKFDAAMVAFLD 509
LPLY SGG RF WD KFD AMVAFLD
Sbjct: 348 ELPLYCSGGLRFFWDNKFDHAMVAFLD 374
Score = 84.6 bits (200), Expect = 3e-16
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 55 LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
LD+E+ Y REY+++++ + +D++K E Q+ Y Q+QL+KLKKTNVF ATFHI SGQ
Sbjct: 222 LDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQ 281
Query: 235 FGIINNF 255
FG INNF
Sbjct: 282 FGTINNF 288
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 CLQQFKEQVEMGNTGFCLPYRID--KGKIEDTASPPHAYSIKIQFNSEEHW 655
C+QQFKE+VE G T FCLPYR+D KGKIEDT +YSIK QFNSEE W
Sbjct: 375 CVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW 425
>AF077301-1|AAC68653.1| 450|Homo sapiens Bcl-2-interacting protein
beclin protein.
Length = 450
Score = 140 bits (339), Expect = 4e-33
Identities = 64/87 (73%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ-K 428
FRLGRLP+ PV+W+EINAAWGQTVLLL +LA K+ FQRY+LVPYGNHSY+E L D+ K
Sbjct: 288 FRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSK 347
Query: 429 VLPLYGSGGFRFLWDTKFDAAMVAFLD 509
LPLY SGG RF WD KFD AMVAFLD
Sbjct: 348 ELPLYCSGGLRFFWDNKFDHAMVAFLD 374
Score = 84.6 bits (200), Expect = 3e-16
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +1
Query: 55 LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
LD+E+ Y REY+++++ + +D++K E Q+ Y Q+QL+KLKKTNVF ATFHI SGQ
Sbjct: 222 LDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQ 281
Query: 235 FGIINNF 255
FG INNF
Sbjct: 282 FGTINNF 288
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 CLQQFKEQVEMGNTGFCLPYRID--KGKIEDTASPPHAYSIKIQFNSEEHW 655
C+QQFKE+VE G T FCLPYR+D KGKIEDT +YSIK QFNSEE W
Sbjct: 375 CVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQW 425
>AB052764-1|BAC53797.1| 345|Homo sapiens shank-interacting
protein-like 1 alpha protein.
Length = 345
Score = 29.9 bits (64), Expect = 9.0
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 519 CCRHLKMLPLPHRIWYPRETGNHPNRIT-VRLSGLPRLLCMSDSHMVLICSAGN 361
C HLK LPLPH PR P R T L L R C S C+AG+
Sbjct: 221 CRSHLKTLPLPHP---PRPLHTLPCRSTPTALLQLSRSRCSQSSVSRQPCNAGS 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,788,237
Number of Sequences: 237096
Number of extensions: 2480004
Number of successful extensions: 5041
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5031
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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