Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0676
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061424-1|AAL28972.1|  422|Drosophila melanogaster LD35669p pro...   154   1e-37
AE014297-3447|AAF56227.1|  422|Drosophila melanogaster CG5429-PA...   154   1e-37
L28945-1|AAA50509.1|  910|Drosophila melanogaster p90 ribosomal ...    30   3.4  
BT004472-1|AAO42636.1|  892|Drosophila melanogaster SD05277p pro...    30   3.4  
AE014298-3193|AAF50945.1|  911|Drosophila melanogaster CG17596-P...    30   3.4  

>AY061424-1|AAL28972.1|  422|Drosophila melanogaster LD35669p
           protein.
          Length = 422

 Score =  154 bits (373), Expect = 1e-37
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKV 431
           FRLGRLP+  VDWSEINAAWGQTVLLLS+LARKI   F+RY++VP+GNHSY+EVL + + 
Sbjct: 264 FRLGRLPSVSVDWSEINAAWGQTVLLLSALARKIGLTFERYRVVPFGNHSYVEVLGENRE 323

Query: 432 LPLYGSGGFRFLWDTKFDAAMVAFLD 509
           LPLYGSGGF+F WDTKFDAAMVAFLD
Sbjct: 324 LPLYGSGGFKFFWDTKFDAAMVAFLD 349



 Score = 92.3 bits (219), Expect = 6e-19
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = +1

Query: 55  LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
           L ++++ YWREYTK+R++LM TED  +  ECQ+AY++ QL+KL+ TN+F  TFHI  +G 
Sbjct: 198 LHEQEESYWREYTKHRRELMLTEDDKRSLECQIAYSKQQLDKLRDTNIFNITFHIWHAGH 257

Query: 235 FGIINNF 255
           FG INNF
Sbjct: 258 FGTINNF 264



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 34/81 (41%), Positives = 46/81 (56%)
 Frame = +2

Query: 413 LGRPESLTVIRFGWFPVSLGYQIRCGNGSIFRCLQQFKEQVEMGNTGFCLPYRIDKGKIE 592
           LG    L +   G F      +      +   CL QF+++VE  +T F LPY+++KGKI 
Sbjct: 318 LGENRELPLYGSGGFKFFWDTKFDAAMVAFLDCLTQFQKEVEKRDTEFLLPYKMEKGKII 377

Query: 593 DTASPPHAYSIKIQFNSEEHW 655
           D  S  ++YSIKIQFNSEE W
Sbjct: 378 D-PSTGNSYSIKIQFNSEEQW 397


>AE014297-3447|AAF56227.1|  422|Drosophila melanogaster CG5429-PA
           protein.
          Length = 422

 Score =  154 bits (373), Expect = 1e-37
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 252 FRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKV 431
           FRLGRLP+  VDWSEINAAWGQTVLLLS+LARKI   F+RY++VP+GNHSY+EVL + + 
Sbjct: 264 FRLGRLPSVSVDWSEINAAWGQTVLLLSALARKIGLTFERYRVVPFGNHSYVEVLGENRE 323

Query: 432 LPLYGSGGFRFLWDTKFDAAMVAFLD 509
           LPLYGSGGF+F WDTKFDAAMVAFLD
Sbjct: 324 LPLYGSGGFKFFWDTKFDAAMVAFLD 349



 Score = 92.3 bits (219), Expect = 6e-19
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = +1

Query: 55  LDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQ 234
           L ++++ YWREYTK+R++LM TED  +  ECQ+AY++ QL+KL+ TN+F  TFHI  +G 
Sbjct: 198 LHEQEESYWREYTKHRRELMLTEDDKRSLECQIAYSKQQLDKLRDTNIFNITFHIWHAGH 257

Query: 235 FGIINNF 255
           FG INNF
Sbjct: 258 FGTINNF 264



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 34/81 (41%), Positives = 46/81 (56%)
 Frame = +2

Query: 413 LGRPESLTVIRFGWFPVSLGYQIRCGNGSIFRCLQQFKEQVEMGNTGFCLPYRIDKGKIE 592
           LG    L +   G F      +      +   CL QF+++VE  +T F LPY+++KGKI 
Sbjct: 318 LGENRELPLYGSGGFKFFWDTKFDAAMVAFLDCLTQFQKEVEKRDTEFLLPYKMEKGKII 377

Query: 593 DTASPPHAYSIKIQFNSEEHW 655
           D  S  ++YSIKIQFNSEE W
Sbjct: 378 D-PSTGNSYSIKIQFNSEEQW 397


>L28945-1|AAA50509.1|  910|Drosophila melanogaster p90 ribosomal S6
           kinase protein.
          Length = 910

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 88  YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 183
           +T+  K++M TE+ +KFY  +LA   + L  L
Sbjct: 286 FTRLSKEVMFTEEDVKFYLAELALAMNHLHTL 317


>BT004472-1|AAO42636.1|  892|Drosophila melanogaster SD05277p
           protein.
          Length = 892

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 88  YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 183
           +T+  K++M TE+ +KFY  +LA   + L  L
Sbjct: 287 FTRLSKEVMFTEEDVKFYLAELALAMNHLHTL 318


>AE014298-3193|AAF50945.1|  911|Drosophila melanogaster CG17596-PA
           protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 88  YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 183
           +T+  K++M TE+ +KFY  +LA   + L  L
Sbjct: 287 FTRLSKEVMFTEEDVKFYLAELALAMNHLHTL 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,430,635
Number of Sequences: 53049
Number of extensions: 728715
Number of successful extensions: 1813
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)