Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0676
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 27 0.22
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 27 0.22
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 27 0.22
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 27 0.22
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 26 0.39
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 26 0.39
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 26 0.39
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 26 0.39
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 25 0.90
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 2.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.4
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 327 LLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
++SSL N YK + Y N +YIE + +P+Y
Sbjct: 303 IISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIY 341
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 327 LLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
++SSL N YK + Y N +YIE + +P+Y
Sbjct: 314 IISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIY 352
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 327 LLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
++SSL N YK + Y N +YIE + +P+Y
Sbjct: 314 IISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIY 352
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 327 LLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
++SSL N YK + Y N +YIE + +P+Y
Sbjct: 303 IISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIY 341
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 354 NFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
N+N YK + Y N +YIE + +P+Y
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 354 NFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
N+N YK + Y N +YIE + +P+Y
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 354 NFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
N+N YK + Y N +YIE + +P+Y
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 354 NFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
N+N YK + Y N +YIE + +P+Y
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPIY 130
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 24.6 bits (51), Expect = 0.90
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 327 LLSSLARK-INFNFQRYKLVPYGNHSYIEVLEDQKVLPL 440
++SSL+ K I+ N YK + Y N +YIE + +P+
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPIPV 119
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 2.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 588 ILPLSILYGRQKPVLP-ISTCSLNCCRHLKMLPLPHRIWYPRETGN 454
IL I+ Q P + LN LK + +PH I TGN
Sbjct: 141 ILDSGIINNTQPMCSPKLHVFDLNTSHQLKQVVMPHDIAVNASTGN 186
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 573 ILYGRQKPVLPISTCSLNC 517
+++ R +PIS CSL C
Sbjct: 435 LIWARGTKDIPISACSLPC 453
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 573 ILYGRQKPVLPISTCSLNC 517
+++ R +PIS CSL C
Sbjct: 525 LIWARGTKDIPISACSLPC 543
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 354 NFNFQRYKLVPYGNHSYIEVLEDQKVLPLY 443
N N+ Y Y N +YIE + +P+Y
Sbjct: 98 NNNYNNYNKKLYYNINYIEQIPVPVPVPVY 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,836
Number of Sequences: 438
Number of extensions: 5141
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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