Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0674
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071152-1|AAL48774.1|  485|Drosophila melanogaster RE18294p pro...    29   6.0  
AF364400-1|AAK50050.1|  481|Drosophila melanogaster neuropeptide...    29   6.0  
AE014297-411|AAF51909.3|  485|Drosophila melanogaster CG1147-PA ...    29   6.0  
AE014296-2119|AAS65016.1|  750|Drosophila melanogaster CG5620-PB...    29   6.0  
AE014296-2118|AAF49939.2|  750|Drosophila melanogaster CG5620-PA...    29   6.0  

>AY071152-1|AAL48774.1|  485|Drosophila melanogaster RE18294p
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = -3

Query: 456 YFHLLC*WFNSILASGTD*GNVVIKYIHIQ*KSIITTSKGLLIFSRNNQ*CLMCIVQVQT 277
           ++H+L   +  ++  G   GN ++    I+ K I+ T++ L I +      L+C+V +  
Sbjct: 85  WYHMLISMYGVLIVFGAL-GNTLVVIAVIR-KPIMRTARNLFILNLAISDLLLCLVTMPL 142

Query: 276 KYKQIDSDYW 247
              +I S YW
Sbjct: 143 TLMEILSKYW 152


>AF364400-1|AAK50050.1|  481|Drosophila melanogaster neuropeptide F
           receptor protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = -3

Query: 456 YFHLLC*WFNSILASGTD*GNVVIKYIHIQ*KSIITTSKGLLIFSRNNQ*CLMCIVQVQT 277
           ++H+L   +  ++  G   GN ++    I+ K I+ T++ L I +      L+C+V +  
Sbjct: 81  WYHMLISMYGVLIVFGAL-GNTLVVIAVIR-KPIMRTARNLFILNLAISDLLLCLVTMPL 138

Query: 276 KYKQIDSDYW 247
              +I S YW
Sbjct: 139 TLMEILSKYW 148


>AE014297-411|AAF51909.3|  485|Drosophila melanogaster CG1147-PA
           protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = -3

Query: 456 YFHLLC*WFNSILASGTD*GNVVIKYIHIQ*KSIITTSKGLLIFSRNNQ*CLMCIVQVQT 277
           ++H+L   +  ++  G   GN ++    I+ K I+ T++ L I +      L+C+V +  
Sbjct: 85  WYHMLISMYGVLIVFGAL-GNTLVVIAVIR-KPIMRTARNLFILNLAISDLLLCLVTMPL 142

Query: 276 KYKQIDSDYW 247
              +I S YW
Sbjct: 143 TLMEILSKYW 152


>AE014296-2119|AAS65016.1|  750|Drosophila melanogaster CG5620-PB,
           isoform B protein.
          Length = 750

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 SLSICLYFVCTCTI-HIKHHWLLRLNMSSPFDVVIIDFHC 370
           SL+    F+ +C++ H+K H +  +  ++PF V+++ F C
Sbjct: 198 SLAFLAVFIFSCSVTHLKEHEVFNVIKAAPFTVIVV-FIC 236


>AE014296-2118|AAF49939.2|  750|Drosophila melanogaster CG5620-PA,
           isoform A protein.
          Length = 750

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 SLSICLYFVCTCTI-HIKHHWLLRLNMSSPFDVVIIDFHC 370
           SL+    F+ +C++ H+K H +  +  ++PF V+++ F C
Sbjct: 198 SLAFLAVFIFSCSVTHLKEHEVFNVIKAAPFTVIVV-FIC 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,736,017
Number of Sequences: 53049
Number of extensions: 522378
Number of successful extensions: 853
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)