Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0673
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.5  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 523 ERMRLIFNFFVK*KLCLFVCLXFG 452
           E ++L F F+    LC+ VC+  G
Sbjct: 148 EAVQLYFQFYYTYFLCVIVCIFRG 171


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 573 FYQPTRRLKWSDYP 614
           FY P R  K +DYP
Sbjct: 248 FYTPARNPKEADYP 261


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 573 FYQPTRRLKWSDYP 614
           FY P R  K +DYP
Sbjct: 240 FYTPKRNPKEADYP 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,949
Number of Sequences: 336
Number of extensions: 2838
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)