Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0672
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23FW6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_UPI00015BD5F0 Cluster: UPI00015BD5F0 related cluster; n... 35 2.2
UniRef50_UPI0000D565ED Cluster: PREDICTED: similar to transmembr... 34 2.9
UniRef50_Q4HSI5 Cluster: Choline kinase; n=1; Campylobacter upsa... 33 5.0
UniRef50_O96204 Cluster: Putative uncharacterized protein PFB055... 33 6.6
UniRef50_Q5FK55 Cluster: Malolactic regulator; n=1; Lactobacillu... 33 8.8
UniRef50_Q2ADV4 Cluster: GGDEF; n=1; Halothermothrix orenii H 16... 33 8.8
UniRef50_Q8ILR0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_Q4Z3S0 Cluster: Pb-reticulocyte binding protein; n=3; P... 33 8.8
UniRef50_Q4XXA1 Cluster: Putative uncharacterized protein; n=2; ... 33 8.8
>UniRef50_Q23FW6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1104
Score = 37.1 bits (82), Expect = 0.41
Identities = 22/92 (23%), Positives = 45/92 (48%)
Frame = -2
Query: 498 IFTQIPIHTHKIYNKIIIEVNIRSQNKTSSTKI*NQLRSLYIHSKTLIKKKRIYYNTHCT 319
+ TQI H+ +NK++ + + + + +Q R + + SK ++KK+I NT+
Sbjct: 63 LITQIINLKHEQFNKLMSKPDYYGEQYEKVRSVTSQSRRMILKSKEYLEKKKIDMNTYYM 122
Query: 318 NHNYTVLHNIVNQVVSKVSILYLLHLNYTKSE 223
N Y N ++V L ++ N+ K++
Sbjct: 123 NQIYVKKVNEALEMVESYQHLIVMIDNFIKAD 154
>UniRef50_UPI00015BD5F0 Cluster: UPI00015BD5F0 related cluster; n=1;
unknown|Rep: UPI00015BD5F0 UniRef100 entry - unknown
Length = 142
Score = 34.7 bits (76), Expect = 2.2
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -2
Query: 495 FTQIPIHTHKIYNKIIIE--VNIRSQNKTSSTKI*NQ--LRSLYIHSKT-LIKKKRIYYN 331
F + +YNKI ++ +N S TK N+ +R+L+ H+K IK + +YN
Sbjct: 36 FNSVKKEKEALYNKIAQYEYISFLIKNGKSKTKTLNENYVRNLFSHTKVDYIKYENGFYN 95
Query: 330 THCTNHNYTVLHNIVNQVVSK-VSILYLLHLNYT 232
+N + L NIV Q+ + I +L +YT
Sbjct: 96 VKASNVDIKTLANIVYQIENDGFKINFLKATDYT 129
>UniRef50_UPI0000D565ED Cluster: PREDICTED: similar to transmembrane
protein 16C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to transmembrane protein 16C - Tribolium
castaneum
Length = 710
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 348 KRIYYNTHCTNHNYTVLHNIVNQVVSKVSILYLLHLNYTKSELKSYRMKLLH*TYL 181
K + Y TNH ++ I+ ++ + H+NY + + K+ ++K L TYL
Sbjct: 641 KGVTYIGVATNHIVMLITGIIAYIIPDIPFSVKEHINYQRDQFKAIKLKALQETYL 696
>UniRef50_Q4HSI5 Cluster: Choline kinase; n=1; Campylobacter
upsaliensis RM3195|Rep: Choline kinase - Campylobacter
upsaliensis RM3195
Length = 301
Score = 33.5 bits (73), Expect = 5.0
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -2
Query: 474 THKIYNKIIIEVNIRSQNKTSSTKI*NQLRSLYIHSKTLIKKKRIYYNTHCTNHNYTVLH 295
T+ NK+I + N N ++K + S+Y K+ IK + N+H NH
Sbjct: 58 TNNTTNKLI-QRNDEKLNDHLASKAKFSVESVYFDEKSGIKITKFLNNSHALNHKSIQDK 116
Query: 294 NIVNQVVSKVSILYLLHLNY 235
NI+ Q+ K+ L+ L +
Sbjct: 117 NILQQIALKLKELHQSKLEF 136
>UniRef50_O96204 Cluster: Putative uncharacterized protein PFB0555c;
n=4; Plasmodium|Rep: Putative uncharacterized protein
PFB0555c - Plasmodium falciparum (isolate 3D7)
Length = 4091
Score = 33.1 bits (72), Expect = 6.6
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Frame = -2
Query: 390 LRSLYIHSKTLIKKKRIYYNTHCTNHNYTVLHNIVNQVVSKVSILYLLHLNYTKSELKSY 211
+++L I + L+ RI TN N + N V ++V K++ N TK K+
Sbjct: 741 IQTLIIFNHNLLSIYRILKTLIGTNTNL-INFNEVTKIVEKLA---QEEGNITKKNHKNI 796
Query: 210 RMKLLH*TYLFKIVLV--------DSVFSTLIEYFF*NRPLFGDFFFLNNLAG*FR 67
M +L T +KI+ + D+++ T IEY++ F +F+ NN+ F+
Sbjct: 797 HMVILEDTLYYKIIYILRKKNINKDTIYITYIEYYYILLDYFCKYFY-NNMDNYFK 851
>UniRef50_Q5FK55 Cluster: Malolactic regulator; n=1; Lactobacillus
acidophilus|Rep: Malolactic regulator - Lactobacillus
acidophilus
Length = 304
Score = 32.7 bits (71), Expect = 8.8
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -2
Query: 390 LRSLYIHSKTL---IKKKRIYYNTHCTNHNYTVLHNIVNQVVSKVSILYLLHLNYTKSE 223
L S YIH+K L +KK +I NT + + TV+ NIV Q + I YL L+ T+++
Sbjct: 195 LSSDYIHTKALDRMLKKSKINLNTIYRSPDVTVVKNIVAQ---NLGISYLTTLSITEND 250
>UniRef50_Q2ADV4 Cluster: GGDEF; n=1; Halothermothrix orenii H
168|Rep: GGDEF - Halothermothrix orenii H 168
Length = 502
Score = 32.7 bits (71), Expect = 8.8
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = -2
Query: 480 IHTHKIYNKIIIEVNIRSQNKTSSTKI*NQLRSLYIHSKTLIKKKRIYYNTHCTNHNYTV 301
I HK Y I + + I + S N ++S YI +TLI+K I + + TN+ Y +
Sbjct: 6 IEKHKYYIIIAVFLIIIFLSYNSYQNTTNIIKSKYITHQTLIEKS-IINSINNTNYAYQI 64
Query: 300 LHNIVNQVVSKVS 262
++N + K+S
Sbjct: 65 AEKLLNDKMEKLS 77
>UniRef50_Q8ILR0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1166
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -2
Query: 468 KIYNKIIIEVNIRSQNKTSSTKI*NQLRSLYIHS--KTLIKKKRIYYNTHCTNHNYTVLH 295
K++NK++ E QN ++ + + +LY + L +RI YN TN ++T
Sbjct: 303 KMFNKMVKEYI--KQNMENNIYVADNKFNLYSYGTGNALYTLERINYNNDKTNEDHTRKL 360
Query: 294 NIVNQVVSKVSILYLLHLNYTKSEL 220
N++++++ +++ +Y K +L
Sbjct: 361 NVISEIIDVKKQKFIIGSSYRKCDL 385
>UniRef50_Q4Z3S0 Cluster: Pb-reticulocyte binding protein; n=3;
Plasmodium (Vinckeia)|Rep: Pb-reticulocyte binding
protein - Plasmodium berghei
Length = 437
Score = 32.7 bits (71), Expect = 8.8
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = -2
Query: 480 IHTHKIYNKIIIEVNIRSQNKTSSTKI*NQLRSLYIHSKTLIKKKRIYYNTHCTNHNYTV 301
IH I+NKI + ++ + N TK + L Y+ L+K + IY++ +C T+
Sbjct: 167 IHVIDIFNKINLNIDNSNNNYYIETKPGSML---YMLGTNLLKNEYIYFDDNCALSFETI 223
Query: 300 --LHNIVNQVVSKVSILYLLHLNYTKSELKS 214
++ V +V++ I Y+ + K K+
Sbjct: 224 GQIYKYVFPLVNETDITYICTMYINKDGNKT 254
>UniRef50_Q4XXA1 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1085
Score = 32.7 bits (71), Expect = 8.8
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -2
Query: 291 IVNQVVSKVSILYLLHLNYTKSELK-SYRMKLLH*TY-LFKIVLVDSVFSTLIEYFF*NR 118
I N+VV K+ + LL L EL + + L + LFK+ +++++ L EY+ N+
Sbjct: 713 IKNEVVDKIYVEELLKLCRLAIELSIKFNINLYEYIFNLFKVYNIENIYFYLCEYYIINK 772
Query: 117 PL-FGDFFFLNNLAG*FRSWLAWC 49
+ F + NL FR + C
Sbjct: 773 KICFTHHSLIENLIEHFRKFYKIC 796
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,700,345
Number of Sequences: 1657284
Number of extensions: 11123718
Number of successful extensions: 24921
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24891
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -