Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0669
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 11  FILLILYIMNTMFIKYLII 67
           F+ +ILYI+ T+F+ Y+ I
Sbjct: 140 FVYVILYILATVFLAYVWI 158


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 11  FILLILYIMNTMFIKYLII 67
           F+ +ILYI+ T+F+ Y+ I
Sbjct: 140 FVYVILYILATVFLAYVWI 158


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 189 TVARFEKLWAVVGMSV 236
           TVA F++ WA +G+ +
Sbjct: 396 TVATFDETWAKLGLEI 411


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/29 (24%), Positives = 19/29 (65%)
 Frame = -2

Query: 90  NRLGPHQMIIKYLINIVFIIYNISNIKLV 4
           N+L  HQ+++  L  +++ IY + ++ ++
Sbjct: 229 NKLYGHQLLLTILTYLIWTIYEMYHLAIL 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,074
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)