Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0668
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    26   0.33 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    26   0.33 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.5  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 239 MCTVLKIPV*HMESHSSIQPYQQ 307
           +C++ ++ V H+ESH +I  YQQ
Sbjct: 181 LCSIPQMVVFHVESHPNITWYQQ 203


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 239 MCTVLKIPV*HMESHSSIQPYQQ 307
           +C++ ++ V H+ESH +I  YQQ
Sbjct: 181 LCSIPQMVVFHVESHPNITWYQQ 203


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 487 YLLICVPNVVFFME 446
           ++L+ VP+ VFF+E
Sbjct: 137 FVLVFVPDYVFFVE 150


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 494 NVLFFYYHYSS 526
           N L FYYH S+
Sbjct: 393 NTLIFYYHIST 403


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 426 RDICVTGSIKKTTLGTQISK*TAMYCFFITIIQVV 530
           RD+ V  S     LG   S   +MYC  I +  +V
Sbjct: 260 RDLWVDLSHMMQQLGKAYSGMYSMYCLLILLTTIV 294


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 426 RDICVTGSIKKTTLGTQISK*TAMYCFFITIIQVV 530
           RD+ V  S     LG   S   +MYC  I +  +V
Sbjct: 260 RDLWVDLSHMMQQLGKAYSGMYSMYCLLILLTTIV 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,653
Number of Sequences: 336
Number of extensions: 4068
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)