Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0668
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-391|AAF59267.1|  176|Drosophila melanogaster CG1707-PA ...   135   6e-32
AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p pro...    29   6.0  
AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-P...    29   6.0  
AY119123-1|AAM50983.1|  514|Drosophila melanogaster RE25285p pro...    29   7.9  
AE014134-2380|AAN10839.1|  514|Drosophila melanogaster CG18507-P...    29   7.9  
AE014134-2379|AAF53321.2|  513|Drosophila melanogaster CG18507-P...    29   7.9  

>AE013599-391|AAF59267.1|  176|Drosophila melanogaster CG1707-PA
           protein.
          Length = 176

 Score =  135 bits (326), Expect = 6e-32
 Identities = 56/79 (70%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   TYNWGTESD-DSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKGL 178
           T+NWGTE D D +YH GN+DPRGFGHIGI+VPDV  AC RF++LGV F+K+P+DG+MKGL
Sbjct: 98  THNWGTERDPDQNYHTGNTDPRGFGHIGIMVPDVYAACQRFQELGVDFVKKPDDGRMKGL 157

Query: 179 AFIQDPDGYWIEIFTSNVV 235
           AFI+DPDGYWIEIF ++ V
Sbjct: 158 AFIKDPDGYWIEIFNAHSV 176


>AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p
           protein.
          Length = 1747

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 71  GHIGILVPDVDVACARFEQLGVKFIKRPND 160
           GH+ +LV D+ +A    E   VKF++ PN+
Sbjct: 532 GHVLLLVQDLHMANPSLESPSVKFVEGPNE 561


>AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-PA
           protein.
          Length = 1747

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 71  GHIGILVPDVDVACARFEQLGVKFIKRPND 160
           GH+ +LV D+ +A    E   VKF++ PN+
Sbjct: 532 GHVLLLVQDLHMANPSLESPSVKFVEGPNE 561


>AY119123-1|AAM50983.1|  514|Drosophila melanogaster RE25285p
           protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 449 HKKNYIGDTNQQINC---NVLFFYYHYSSCVNFFIKAIVHLNST 571
           HK   + D   +I+C   N+ F Y+  + CVNF  + + H   T
Sbjct: 361 HKILLVLDDRGRISCHKVNLCFMYFDATQCVNFLNEFLEHTEQT 404


>AE014134-2380|AAN10839.1|  514|Drosophila melanogaster CG18507-PA,
           isoform A protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 449 HKKNYIGDTNQQINC---NVLFFYYHYSSCVNFFIKAIVHLNST 571
           HK   + D   +I+C   N+ F Y+  + CVNF  + + H   T
Sbjct: 361 HKILLVLDDRGRISCHKVNLCFMYFDATQCVNFLNEFLEHTEQT 404


>AE014134-2379|AAF53321.2|  513|Drosophila melanogaster CG18507-PB,
           isoform B protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 449 HKKNYIGDTNQQINC---NVLFFYYHYSSCVNFFIKAIVHLNST 571
           HK   + D   +I+C   N+ F Y+  + CVNF  + + H   T
Sbjct: 361 HKILLVLDDRGRISCHKVNLCFMYFDATQCVNFLNEFLEHTEQT 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,353,388
Number of Sequences: 53049
Number of extensions: 652813
Number of successful extensions: 1448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)