Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0668
         (689 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g08110.2 68414.m00889 lactoylglutathione lyase, putative / gl...   130   8e-31
At1g08110.1 68414.m00888 lactoylglutathione lyase, putative / gl...   130   8e-31
At1g67280.1 68414.m07657 lactoylglutathione lyase, putative / gl...    42   3e-04
At1g11840.3 68414.m01360 lactoylglutathione lyase, putative / gl...    40   0.002
At1g11840.2 68414.m01362 lactoylglutathione lyase, putative / gl...    40   0.002
At1g11840.1 68414.m01361 lactoylglutathione lyase, putative / gl...    40   0.002
At2g28420.1 68415.m03453 lactoylglutathione lyase family protein...    32   0.31 
At2g32090.2 68415.m03923 lactoylglutathione lyase family protein...    31   0.95 
At2g32090.1 68415.m03922 lactoylglutathione lyase family protein...    31   0.95 
At4g36030.1 68417.m05129 armadillo/beta-catenin repeat family pr...    30   1.7  
At1g15380.1 68414.m01841 lactoylglutathione lyase family protein...    29   2.9  
At4g24120.1 68417.m03462 transporter, putative similar to iron-p...    28   6.7  
At1g07645.1 68414.m00822 lactoylglutathione lyase family protein...    28   6.7  
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ...    27   8.9  

>At1g08110.2 68414.m00889 lactoylglutathione lyase, putative /
           glyoxalase I, putative similar to lactoylglutathione
           lyase SP:O04885 from [Brassica juncea]
          Length = 185

 Score =  130 bits (314), Expect = 8e-31
 Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   TYNWGTESDDS--SYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG 175
           T+NWGTESD     YHNGNS+PRGFGHIG+ V DV  AC RFE+LGV+F K+PNDGKMK 
Sbjct: 98  THNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKN 157

Query: 176 LAFIQDPDGYWIEIFTSNVV*MCTV 250
           +AFI+DPDGYWIEIF    +   TV
Sbjct: 158 IAFIKDPDGYWIEIFDLKTIGTTTV 182


>At1g08110.1 68414.m00888 lactoylglutathione lyase, putative /
           glyoxalase I, putative similar to lactoylglutathione
           lyase SP:O04885 from [Brassica juncea]
          Length = 185

 Score =  130 bits (314), Expect = 8e-31
 Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   TYNWGTESDDS--SYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG 175
           T+NWGTESD     YHNGNS+PRGFGHIG+ V DV  AC RFE+LGV+F K+PNDGKMK 
Sbjct: 98  THNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPNDGKMKN 157

Query: 176 LAFIQDPDGYWIEIFTSNVV*MCTV 250
           +AFI+DPDGYWIEIF    +   TV
Sbjct: 158 IAFIKDPDGYWIEIFDLKTIGTTTV 182


>At1g67280.1 68414.m07657 lactoylglutathione lyase, putative /
           glyoxalase I, putative similar to putative
           lactoylglutathione lyase SP:Q39366, GI:2494843 from
           [Brassica oleracea]
          Length = 350

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
 Frame = +2

Query: 2   TYNWGTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG-- 175
           TYN+G +  D           GFGH GI V DV       +  G K  + P  G +KG  
Sbjct: 144 TYNYGVDKYDIG--------AGFGHFGIAVDDVAKTVELVKAKGGKVSREP--GPVKGGK 193

Query: 176 --LAFIQDPDGYWIEI 217
             +AFI+DPDGY  E+
Sbjct: 194 TVIAFIEDPDGYKFEL 209


>At1g11840.3 68414.m01360 lactoylglutathione lyase, putative /
           glyoxalase I, putative highly similar to putative
           lactoylglutathione lyase SP:Q39366 from [Brassica
           oleracea]
          Length = 232

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   TYNWGTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG-- 175
           TYN+G     SSY  G     GFGH  I   DV          G    + P   K  G  
Sbjct: 73  TYNYGV----SSYDIGT----GFGHFAISTQDVSKLVENVRAKGGNVTREPGPVKGGGSV 124

Query: 176 LAFIQDPDGYWIEI 217
           +AF++DPDGY  E+
Sbjct: 125 IAFVKDPDGYTFEL 138


>At1g11840.2 68414.m01362 lactoylglutathione lyase, putative /
           glyoxalase I, putative highly similar to putative
           lactoylglutathione lyase SP:Q39366 from [Brassica
           oleracea]
          Length = 283

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   TYNWGTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG-- 175
           TYN+G     SSY  G     GFGH  I   DV          G    + P   K  G  
Sbjct: 73  TYNYGV----SSYDIGT----GFGHFAISTQDVSKLVENVRAKGGNVTREPGPVKGGGSV 124

Query: 176 LAFIQDPDGYWIEI 217
           +AF++DPDGY  E+
Sbjct: 125 IAFVKDPDGYTFEL 138


>At1g11840.1 68414.m01361 lactoylglutathione lyase, putative /
           glyoxalase I, putative highly similar to putative
           lactoylglutathione lyase SP:Q39366 from [Brassica
           oleracea]
          Length = 283

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   TYNWGTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDGKMKG-- 175
           TYN+G     SSY  G     GFGH  I   DV          G    + P   K  G  
Sbjct: 73  TYNYGV----SSYDIGT----GFGHFAISTQDVSKLVENVRAKGGNVTREPGPVKGGGSV 124

Query: 176 LAFIQDPDGYWIEI 217
           +AF++DPDGY  E+
Sbjct: 125 IAFVKDPDGYTFEL 138


>At2g28420.1 68415.m03453 lactoylglutathione lyase family protein /
           glyoxalase I family protein contains glyoxalase family
           protein domain, Pfam:PF00903
          Length = 184

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 74  HIGILVPDVDVACARFEQLGVKFIKRP-NDGKMKGL--AFIQDPDGYWIEI 217
           HI     D++    R +++ VK+IKR   D K   +   F  DPDG+ +EI
Sbjct: 91  HISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGFMVEI 141


>At2g32090.2 68415.m03923 lactoylglutathione lyase family protein /
           glyoxalase I family protein contains glyoxalase family
           protein domain, Pfam:PF00903
          Length = 113

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +2

Query: 14  GTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVK-FIKRPNDGKMKGLAFIQ 190
           G  S  S+  + +  P G  HI   VP+ D      ++ G++ F K   DGK+K + F  
Sbjct: 43  GPYSATSAVKDPSHLPMGH-HICFSVPNFDSFLHSLKEKGIETFQKSLPDGKVKQVFFF- 100

Query: 191 DPDGYWIEI 217
           DPDG  +E+
Sbjct: 101 DPDGNGLEV 109


>At2g32090.1 68415.m03922 lactoylglutathione lyase family protein /
           glyoxalase I family protein contains glyoxalase family
           protein domain, Pfam:PF00903
          Length = 135

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +2

Query: 14  GTESDDSSYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVK-FIKRPNDGKMKGLAFIQ 190
           G  S  S+  + +  P G  HI   VP+ D      ++ G++ F K   DGK+K + F  
Sbjct: 65  GPYSATSAVKDPSHLPMGH-HICFSVPNFDSFLHSLKEKGIETFQKSLPDGKVKQVFFF- 122

Query: 191 DPDGYWIEI 217
           DPDG  +E+
Sbjct: 123 DPDGNGLEV 131


>At4g36030.1 68417.m05129 armadillo/beta-catenin repeat family
           protein contains Pfam profile: PF00514
           armadillo/beta-catenin-like repeat
          Length = 670

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 47  GNSDPRGFGHIGI--LVPDVDVACARFEQLGVKFIKRPND 160
           GN D  GFG++G+  +  +  + C  +EQ+ V     P D
Sbjct: 126 GNDDDEGFGYLGLPPIAANEPILCLIWEQIAVLMTGSPED 165


>At1g15380.1 68414.m01841 lactoylglutathione lyase family protein /
           glyoxalase I family protein contains glyoxalase family
           protein domain, Pfam:PF00903
          Length = 174

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
 Frame = +2

Query: 74  HIGILVPDVDVACARFEQLGVKFIKR--PNDGKMKGLAFIQDPDGYWIEIFTSN---VV* 238
           HI      + V   + E++G+ +++      G      F  DPDG+ IEI   +   VV 
Sbjct: 83  HISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVVP 142

Query: 239 MCTVLKIPV*HMESHSSIQPYQQ 307
           +   +      ++ H  +QP  Q
Sbjct: 143 LVGEMARSCSRVKLHQMVQPQPQ 165


>At4g24120.1 68417.m03462 transporter, putative similar to
           iron-phytosiderophore transporter protein yellow stripe
           1 [Zea mays] GI:10770865; contains Pfam profile PF03169:
           OPT oligopeptide transporter protein
          Length = 665

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/36 (27%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 297 GWIDEWLSM-CYTGIFNTVHIQTTLLVNISIQ*PSG 193
           GW+  +L + C+ G+F  + ++  ++V++ +  PSG
Sbjct: 157 GWMTAYLFVVCFIGLFVLIPLRKVMIVDLKLTYPSG 192


>At1g07645.1 68414.m00822 lactoylglutathione lyase family protein /
           glyoxalase I family protein Contains Pfam profile
           PF00903:glyoxalase family protein
          Length = 137

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 92  PDVDVACARFEQLGVKFIKRPNDGKM-KGLAFIQDPDGYWIEI 217
           PDVD A  R  + G + + +P D +  + + +++D DG  + I
Sbjct: 90  PDVDAAFKRAVENGAEAVSKPEDKEWGQKVGYVRDIDGIVVRI 132


>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 503

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 26  DDSSYHNGNSDPRGFGHIGILVPDVDVACARF 121
           ++S+  N  + P GF H G+  PD++ A ++F
Sbjct: 236 NESNVMNNPNLPHGFVHRGVHHPDINAAISQF 267


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,993,036
Number of Sequences: 28952
Number of extensions: 304074
Number of successful extensions: 587
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)