Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0667
(694 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 30 0.018
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.90
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.90
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 1.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.4
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 6.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 8.4
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 30.3 bits (65), Expect = 0.018
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 451 ARRRSAEACDVIEEKAHFDAGNMLRLNRSPVFRSPARGPIS 573
ARRR A + +EE+ + G +R+ R P+ P+ P+S
Sbjct: 406 ARRRVEAALEAVEEERQREYG--IRVERDPILTPPSSNPVS 444
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
+N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 242 RNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 135 KNRFRNGRNS*FDRERSQQRIERYR*RETR 224
+N +R R + +ERS+ RIER R RE +
Sbjct: 286 ENSYRKYRET--SKERSRDRIERERSREPK 313
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 138 NRFRNGRNS*FDRERSQQRIERYR*RETRHGLIRFHLEEETDLR 269
N +RN R+RS++ ++ R + H + HL E T R
Sbjct: 243 NSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRR 286
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 613 RSEILCDTPDNIPDNALQRPSVER 684
RS ++CD N +N L P +ER
Sbjct: 57 RSYVVCDVAYNNVNNWLWTPFIER 80
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 665 CNALSGILSGVSQRISERLSDNSFFGTSS 579
C A +GI SG+ + + +++ + +F S
Sbjct: 786 CQASNGIGSGIGKVVQLKVNSSPYFAAPS 814
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 382 FFNASNLYGLDAKLL 338
F ASNLYG D +L+
Sbjct: 886 FCQASNLYGRDQQLV 900
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 665 CNALSGILSGVSQRISERLSDNSFFGTSS 579
C A +GI SG+ + + +++ + +F S
Sbjct: 782 CQASNGIGSGIGKVVQLKVNSSPYFAAPS 810
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 382 FFNASNLYGLDAKLL 338
F ASNLYG D +L+
Sbjct: 882 FCQASNLYGRDQQLV 896
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 151 MDEIRDSIENVRNNESSDTDNEK 219
+D S+EN N +D+D EK
Sbjct: 177 LDNQEVSMENTENKSCTDSDIEK 199
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 442 CXFARRRSAEACDVIEEKAHFDAGNMLRLNR 534
C F+R S CD + D + RL R
Sbjct: 3 CPFSRDLSKPGCDEQTSRGDNDRSRIARLGR 33
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 213 VIGIARFVVANVLDRITNFVHFEI 142
+IGI +N DR+T +V+ EI
Sbjct: 22 IIGINAANFSNFEDRVTMYVYEEI 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,030
Number of Sequences: 438
Number of extensions: 3170
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -