Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0666
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   9.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 SMRDRSAETGSVASARRVPPYPLIAHYLHQ 252
           S    S+ + S + A R+ PY   AH+ HQ
Sbjct: 43  SSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 SMRDRSAETGSVASARRVPPYPLIAHYLHQ 252
           S    S+ + S + A R+ PY   AH+ HQ
Sbjct: 43  SSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 318 RNFITRISTTDINSVTRVNKVRLVQVMSYKRIRRNTA 208
           +N +  + + D+N    VN+    +V+S   IR NTA
Sbjct: 104 KNSVGSVHSRDVNVRAVVNQYYEAEVVSEYVIRGNTA 140


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +1

Query: 229 LIAHYLHQPYLVNTCHAVYICCRY 300
           L  +Y +  +++ T H +++ C Y
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIY 134



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +1

Query: 229 LIAHYLHQPYLVNTCHAVYICCRY 300
           L  +Y +  +++ T H +++ C Y
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIY 167


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = +2

Query: 368 FLMYFIFYCF 397
           FL++++FYC+
Sbjct: 14  FLLFYLFYCY 23


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = +2

Query: 368 FLMYFIFYCF 397
           FL++++FYC+
Sbjct: 14  FLLFYLFYCY 23


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 617 TNENQTRKIIICVITGGRTTCESARVGTT 531
           +NE   +  + C++  GR T E  ++ +T
Sbjct: 33  SNERLLKNYVNCLLDKGRCTPEGKKLKST 61


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 208 RRVPPYPLIAHYLHQ 252
           R  PP P+IA  L+Q
Sbjct: 57  RMFPPVPIIARQLNQ 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,511
Number of Sequences: 336
Number of extensions: 3640
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)