Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0666
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    27   0.17 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    27   0.17 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.4  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +1

Query: 211 RVPPYPLIAHYLH---QPYLVNTCHAVYICCRYSCNKIP 318
           R   YP++ H  H   QP  +N C AV   C + C   P
Sbjct: 13  RALKYPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAP 51


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +1

Query: 211 RVPPYPLIAHYLH---QPYLVNTCHAVYICCRYSCNKIP 318
           R   YP++ H  H   QP  +N C AV   C + C   P
Sbjct: 13  RALKYPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAP 51


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 674 VRIPLVGDICQVISRHIHSTNENQTRKIIICVITGGRTTCESARVGTT 531
           + + + GD+ QV  R +H+ NE + R +       G  T     +GTT
Sbjct: 230 ISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTT 277


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 528 GGCTYPRGLTSGPTTSNY 581
           G C +PRG   G TT ++
Sbjct: 140 GSCYWPRGKNLGGTTLHH 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,772
Number of Sequences: 438
Number of extensions: 4145
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)