Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0664
(585 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory su... 136 3e-31
UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8; Fungi... 106 3e-22
UniRef50_Q0J9C1 Cluster: Os04g0661900 protein; n=1; Oryza sativa... 99 4e-20
UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory su... 86 7e-16
UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;... 85 1e-15
UniRef50_A6RHI2 Cluster: 26S proteasome regulatory subunit rpn8;... 74 3e-12
UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle non-... 71 2e-11
UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit, puta... 71 2e-11
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 69 1e-10
UniRef50_A7QLC2 Cluster: Chromosome chr11 scaffold_118, whole ge... 69 1e-10
UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, wh... 64 2e-09
UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle non-... 64 3e-09
UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like metallop... 62 1e-08
UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n... 57 3e-07
UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subun... 53 6e-06
UniRef50_A3BIG9 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A2YK37 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q7L5N1 Cluster: COP9 signalosome complex subunit 6; n=3... 48 2e-04
UniRef50_Q8SS61 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 12; n... 43 0.005
UniRef50_Q8W206 Cluster: COP9 signalosome complex subunit 6a; n=... 40 0.033
UniRef50_Q7REN3 Cluster: Putative uncharacterized protein PY0503... 36 0.93
UniRef50_UPI00015B5544 Cluster: PREDICTED: similar to ENSANGP000... 33 3.8
UniRef50_Q88VZ1 Cluster: Putative uncharacterized protein lp_188... 33 3.8
UniRef50_Q8ESP6 Cluster: Putative uncharacterized protein OB0578... 33 5.0
UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=... 33 6.6
UniRef50_A5V4S7 Cluster: Regulatory protein, LuxR; n=1; Sphingom... 32 8.7
UniRef50_Q241B7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q23JI0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
>UniRef50_P51665 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=51; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 7 - Homo sapiens (Human)
Length = 324
Score = 136 bits (330), Expect = 3e-31
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTF 189
HTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VEEVHDDGTPTS+TF
Sbjct: 96 HTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTF 155
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
EHV SEI HLLR
Sbjct: 156 EHVTSEIGAEEAEEVGVEHLLR 177
Score = 128 bits (310), Expect = 7e-29
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKDTTVG+LSQRITNQ+ GLKGL+S+L +IR YL +V G LP+NHQIIYQL
Sbjct: 171 GVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQL 230
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QD+FNLLPD++ F+ Y+KTNDQ +VVYL
Sbjct: 231 QDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYL 262
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
A+L+RS++ALHNLINNKI NRDAE+
Sbjct: 263 ASLIRSVVALHNLINNKIANRDAEK 287
>UniRef50_Q86F68 Cluster: Clone ZZD1069 mRNA sequence; n=8;
Fungi/Metazoa group|Rep: Clone ZZD1069 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 356
Score = 106 bits (255), Expect = 3e-22
Identities = 52/92 (56%), Positives = 66/92 (71%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKDT++GSLSQRI QL GL GL QL EIR+YL V G LP+NH +IY L
Sbjct: 188 GVEHLLRDIKDTSLGSLSQRIGCQLDGLSGLVRQLCEIREYLQLVSSGKLPVNHGVIYHL 247
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QDIFNLLPD+ + + ++V TNDQ LV+Y+
Sbjct: 248 QDIFNLLPDLKLHDTVRAIHVNTNDQMLVIYV 279
Score = 101 bits (242), Expect = 1e-20
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDL-GLPTEAYQAVEEVHDDGTPTSRT 186
H+GPKL NDI INEL R+Y NSVLV++D + K++ GLPTEAY AVEEVHDDG+PT+++
Sbjct: 112 HSGPKLCTNDIKINELFRKYASNSVLVVVDVRRKEVDGLPTEAYIAVEEVHDDGSPTTKS 171
Query: 187 FEHVPSEIXXXXXXXXXXXHLLR 255
F+H+ SE+ HLLR
Sbjct: 172 FDHLRSEVDAEEAEEVGVEHLLR 194
Score = 38.3 bits (85), Expect = 0.13
Identities = 15/24 (62%), Positives = 23/24 (95%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAE 580
AA++R+I+ALH+LI+NK+TNR+ E
Sbjct: 280 AAIMRAILALHDLISNKLTNRETE 303
>UniRef50_Q0J9C1 Cluster: Os04g0661900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os04g0661900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 159
Score = 99 bits (238), Expect = 4e-20
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D+KDTT+ +L+ +T++L LKGL ++L EIR YL V +G LP+NH+I+Y L
Sbjct: 28 GVEHLLRDVKDTTISTLATEVTSKLAALKGLDARLREIRGYLDLVIEGKLPLNHEILYHL 87
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QD+FNLLP++ + I VKTND LV+YL
Sbjct: 88 QDVFNLLPNLNVNELIKAFAVKTNDMMLVIYL 119
Score = 38.7 bits (86), Expect = 0.100
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
++L+RS+IALHNLINNK+ N++ E+
Sbjct: 120 SSLIRSVIALHNLINNKMLNKEHEK 144
>UniRef50_Q54WI8 Cluster: 26S proteasome non-ATPase regulatory
subunit 7; n=1; Dictyostelium discoideum AX4|Rep: 26S
proteasome non-ATPase regulatory subunit 7 -
Dictyostelium discoideum AX4
Length = 325
Score = 85.8 bits (203), Expect = 7e-16
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTFE 192
TGPK+ D INEL RRY PN V+VIID PK+LG+PT++Y VEE++ D + ++ F+
Sbjct: 95 TGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMRFQ 154
Query: 193 HVPSEIXXXXXXXXXXXHLLR 255
H+PS I HLLR
Sbjct: 155 HIPSSIDAVEAEEICIEHLLR 175
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/87 (40%), Positives = 57/87 (65%)
Frame = +3
Query: 249 VKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
++D+KD+++ SL+ +IT++ + LK L + L E++ YL V G+LP NHQII +QDI N
Sbjct: 174 LRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIIN 233
Query: 429 LLPDIANDNFIDNLYVKTNDQSLVVYL 509
L P++ + + V+ ND V+YL
Sbjct: 234 LSPNLNANEISKSFAVQNNDTMSVIYL 260
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 467 FVCQNQ*SITCGIFAALVRSIIALHNLINNKITNRDAEE 583
F QN +++ ++++RSIIALHNLI NK NR+AE+
Sbjct: 247 FAVQNNDTMSVIYLSSMIRSIIALHNLIINKTANREAEK 285
>UniRef50_Q08723 Cluster: 26S proteasome regulatory subunit RPN8;
n=27; Eukaryota|Rep: 26S proteasome regulatory subunit
RPN8 - Saccharomyces cerevisiae (Baker's yeast)
Length = 338
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNS-VLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRT 186
H+GPKL +D+ INEL ++Y N+ +L+I+D K + +GLPT+AY A+E+V DDGT T +T
Sbjct: 94 HSGPKLRASDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGTSTEKT 153
Query: 187 FEHVPSEIXXXXXXXXXXXHLLR 255
F H+P I HLLR
Sbjct: 154 FLHLPCTIEAEEAEEIGVEHLLR 176
Score = 76.2 bits (179), Expect = 5e-13
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 17/109 (15%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D++D G LS R+TNQL LKGL S+L ++ +YL +V LP+NH I+ +L
Sbjct: 170 GVEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKL 229
Query: 414 QDIFNLLPDIA--NDNFID---------------NLYVKTNDQSLVVYL 509
QD+FNLLP++ +D+ ID L VKTND+ +V+Y+
Sbjct: 230 QDVFNLLPNLGTPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYI 278
>UniRef50_A6RHI2 Cluster: 26S proteasome regulatory subunit rpn8;
n=1; Ajellomyces capsulatus NAm1|Rep: 26S proteasome
regulatory subunit rpn8 - Ajellomyces capsulatus NAm1
Length = 307
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHD 162
H+GPKL D+ INEL +RY PN +LVIID +PK++G+PT+AY AVEE+ D
Sbjct: 102 HSGPKLRAADLEINELFKRYTPNPLLVIIDVQPKEVGVPTDAYFAVEEIKD 152
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 315 LKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIA 446
+K HS L +I YL +V G LP+ H I+ LQD+FNLLP+++
Sbjct: 150 IKDSHS-LRDIGQYLQKVLDGDLPVKHAILGNLQDVFNLLPNLS 192
Score = 32.3 bits (70), Expect = 8.7
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
++L+R+I A H+LI NKI NR +E
Sbjct: 232 SSLIRAITAFHDLIENKIQNRQQQE 256
>UniRef50_A7ATP2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8, putative; n=3; Piroplasmida|Rep:
26S proteasome regulatory particle non-ATPase subunit8,
putative - Babesia bovis
Length = 306
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D+ + T +LS ++ N++L LK L +L EI DYL V G +N I+Y L
Sbjct: 175 GLEHLLRDLTNVTTSTLSTKVDNKVLALKSLVLKLAEIVDYLKGVIGGQYNLNPAIVYML 234
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QDI NL P + +D + + ND SL +YL
Sbjct: 235 QDILNLFPSVDSDAIKEAFIINMNDTSLAIYL 266
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/81 (44%), Positives = 46/81 (56%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTFE 192
TGPK D+ I+EL R+YCPN + +I+D K+ +P EAY +VEE D RTF
Sbjct: 103 TGPKCKPADLEIHELYRKYCPNPIYIIVDINQKE-EVPIEAYVSVEEPTSD-RRFRRTFA 160
Query: 193 HVPSEIXXXXXXXXXXXHLLR 255
HVPSE+ HLLR
Sbjct: 161 HVPSEMGAFEAEEVGLEHLLR 181
>UniRef50_Q8I323 Cluster: 26S proteasome regulatory subunit,
putative; n=8; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium falciparum (isolate 3D7)
Length = 338
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G +K++K + +L+ ++ ++L LK L ++L EI YL + G++ MN +I+Y L
Sbjct: 182 GVEFLLKELKSVSTSTLATKVGDKLSSLKSLIAKLYEISAYLNDILNGNIEMNIKILYNL 241
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
Q++F+LLPDI N + + VK ND L +Y+
Sbjct: 242 QNVFSLLPDIENVDLVQAFMVKNNDLMLNIYI 273
Score = 39.1 bits (87), Expect = 0.076
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEE-VHDDGTPTSRTF 189
TG + NDI INE+ +Y + ++++ P AY A+E+ +H++ +TF
Sbjct: 109 TGSNIKPNDIFINEIFYKYHHAPIFLLVNVHTDQSIFPVNAYVAIEKAIHEN--KFRKTF 166
Query: 190 EHVPSEI 210
H+P +I
Sbjct: 167 IHIPVKI 173
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 512 ALVRSIIALHNLINNKITNR 571
++ RS+IALHNLINNKI N+
Sbjct: 275 SITRSVIALHNLINNKIENK 294
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGT-PTSRTF 189
TGPKL NDI I+EL Y V+VI+D + ++ +PT A+ A EV +DGT +TF
Sbjct: 100 TGPKLRDNDIDIHELFYAYAQEPVMVIVDVRAENANIPTSAFAAQIEVKEDGTEKQQKTF 159
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
HVP+ I HLLR
Sbjct: 160 VHVPNSIQAFEAEEIGVEHLLR 181
>UniRef50_A7QLC2 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 97
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSR 183
TGP L +ND+ I+ L Y PN VLVI+D +PK++G+PT+AY AVEEV + T S+
Sbjct: 28 TGPTLQENDLDIHGLFHDYVPNPVLVIMDVQPKEIGIPTKAYYAVEEVKESATQKSQ 84
>UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_32, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/92 (30%), Positives = 51/92 (55%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G +++I + SLS + ++ G+KG++ ++ +I+ YL + QG + N II L
Sbjct: 173 GVEQLLREINNVDTQSLSAKAEQKINGVKGMNKKIAQIQQYLTLIQQGKVKPNQLIINNL 232
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
Q+I N LP++ + + + K ND L +YL
Sbjct: 233 QEILNYLPNLGSQDVVQAFTTKNNDNMLTIYL 264
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKD-LGLPTEAYQAVEEVHDDGTPTSRTF 189
TG + NDI IN++ +Y + VIID D L LPTEAY +V+E+ G + F
Sbjct: 99 TGSRFKPNDIQINQIFYKYTSTPIFVIIDVHQFDPLSLPTEAYTSVDEISKSG-EIIQNF 157
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
H+PS + LLR
Sbjct: 158 VHIPSTVQAFEPEEIGVEQLLR 179
>UniRef50_Q5CJF2 Cluster: 26S proteasome regulatory particle
non-ATPase subunit8; n=2; Cryptosporidium|Rep: 26S
proteasome regulatory particle non-ATPase subunit8 -
Cryptosporidium hominis
Length = 313
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/91 (36%), Positives = 53/91 (58%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D+K+T+ +L +I++ + K L S+L E ++YL + +G +P NH+II L
Sbjct: 187 GVEHLLRDLKNTSTSTLITQISDTINSCKILVSKLKESKNYLNDIVEGRIPPNHRIISVL 246
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVY 506
QDIFNLLPD+ I + D L +Y
Sbjct: 247 QDIFNLLPDLREPEAIYAFSNRYADMILTIY 277
Score = 49.6 bits (113), Expect = 5e-05
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTFE 192
TGPK DI I+EL RRYCP+ + +I D D + A + + + + F
Sbjct: 113 TGPKTKVVDIDIHELFRRYCPDPLYLIADVTADDFEYLSSPISAYFSMDEPNSVLKKKFA 172
Query: 193 HVPSEIXXXXXXXXXXXHLLR 255
HVP I HLLR
Sbjct: 173 HVPCTIGAFEAEEVGVEHLLR 193
>UniRef50_A2DP46 Cluster: Clan MP, family M67, Poh1-like
metallopeptidase; n=2; Trichomonas vaginalis G3|Rep:
Clan MP, family M67, Poh1-like metallopeptidase -
Trichomonas vaginalis G3
Length = 311
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/92 (31%), Positives = 52/92 (56%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKD + ++ +TN + GL L +L I YL V G L ++++I+ +
Sbjct: 175 GVEHLLRDIKDVDMSAIGCTLTNSIHGLAALEHRLRAISQYLGDVIDGKLQIDNEILGVI 234
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
Q IFNLLP+ +D+L K +D + ++++
Sbjct: 235 QSIFNLLPNFELKETVDSLNTKADDATFMIFI 266
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 34 NDIAINELIRRYCPNSVLVIIDAKPKDLG-LPTEAYQAVEEVHDDGTPTSRTFEHVPSEI 210
ND+ I+ + YCP+ + + D D +P A+ E V DG P +F ++P+ +
Sbjct: 107 NDLEIHRKMCDYCPDPIFLTTDVGASDPHEIPACAFLGAERVRKDGQPIVTSFRNIPTTV 166
Query: 211 XXXXXXXXXXXHLLR 255
HLLR
Sbjct: 167 EFLEVEEIGVEHLLR 181
>UniRef50_UPI0000498D3B Cluster: proteasome regulatory subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 314
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D++ T L + ++ L+ L ++ +R+YL V G +P+N +II +
Sbjct: 177 GVERLLRDLQKPTGTVLKHEVELKMDSLRALDDKIKLMRNYLELVESGKIPVNQKIIQNI 236
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QDIFNL P+I + + V TND + +YL
Sbjct: 237 QDIFNLSPNI--EKYTQQFAVNTNDVMVTIYL 266
>UniRef50_Q4Q5P6 Cluster: Proteasome regulatory non-ATP-ase subunit
8, putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit 8, putative - Leishmania
major
Length = 359
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/92 (27%), Positives = 50/92 (54%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++D+ D+T+ +LS ++ + L L L L +I +YL VG +P++ ++ L
Sbjct: 210 GIEHLLRDLTDSTITTLSTQVQERELSLVHLCKVLQQIEEYLKDVGNAVMPISEDVLEVL 269
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
Q++ +L P+I + TND+++ +L
Sbjct: 270 QELISLQPEIYARRSSTEMIRHTNDEAIATFL 301
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 TGPKLHQNDIAINELIR-RYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTF 189
+GP + ND+ ++ L+ R+C N V +++ P + G+P AY V+ +GT S F
Sbjct: 138 SGPTIQPNDMLLHLLVADRFCLNPVYCVVNTDPNNKGVPVRAYTTVQ--GREGT-RSLEF 194
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
++P+ + HLLR
Sbjct: 195 RNIPTHLGAEEAEEIGIEHLLR 216
>UniRef50_A3BIG9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 740
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 213 CRGG*RSGSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYL 359
C GG G + D+KDTT+G+L+ +T++L LKGL ++L EIR YL
Sbjct: 691 CCGG---GVEHLLMDVKDTTIGTLATEVTSKLAALKGLDARLREIRRYL 736
>UniRef50_A2YK37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 875
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 213 CRGG*RSGSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYL 359
C GG G + D+KDTT+G+L+ +T++L LKGL ++L EIR YL
Sbjct: 826 CCGG---GVEHLLMDVKDTTIGTLATEVTSKLAALKGLDARLREIRRYL 871
>UniRef50_Q7L5N1 Cluster: COP9 signalosome complex subunit 6; n=39;
Eumetazoa|Rep: COP9 signalosome complex subunit 6 - Homo
sapiens (Human)
Length = 327
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = +3
Query: 279 SLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNF 458
++++ + Q +K LHS++ I +Y+ G +P NH+I+ + + + LP ++ D F
Sbjct: 216 TVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKF 275
Query: 459 IDNLYVKTNDQSLVVYL 509
+ Y + ND L+ YL
Sbjct: 276 KTDFYDQCNDVGLMAYL 292
>UniRef50_Q8SS61 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 12; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 12 - Encephalitozoon cuniculi
Length = 258
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DI++ GS++ RI L L EIR YL V G + +N +II
Sbjct: 149 GVEHLIRDIREEASGSIAARINGIKESLAVYRGVLGEIRSYLNDVISGDIHLNQEIINLC 208
Query: 414 QDIFNLLPDIAN--DNFIDNLYVKTNDQSLV 500
Q+I N P + D + + YV +++V
Sbjct: 209 QEIINSTPKLERPLDENLSDCYVSVLAKTVV 239
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEE 153
HTGP++++ND+ I + + + L II+ + LP + ++ E+
Sbjct: 83 HTGPRMYENDLDITRSLGSFVESPFLAIINVHLGENDLPVQTFKLDEQ 130
>UniRef50_Q8W206 Cluster: COP9 signalosome complex subunit 6a; n=11;
Magnoliophyta|Rep: COP9 signalosome complex subunit 6a -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 40.3 bits (90), Expect = 0.033
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +3
Query: 249 VKDIKDTTVGSLSQRITNQLLGL----KGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQ 416
V +K + GS + ++ L G+ K L+S++ + L + +G ++ ++ Q+
Sbjct: 193 VAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVS 252
Query: 417 DIFNLLPDIANDNFIDNLYVKTNDQSLVVYLLL 515
+ LP + ++ F DN ++ ND+ L+ YL +
Sbjct: 253 SLLRRLPAMESERFQDNFLMEYNDKLLITYLAM 285
>UniRef50_Q7REN3 Cluster: Putative uncharacterized protein PY05031;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05031 - Plasmodium yoelii yoelii
Length = 1123
Score = 35.5 bits (78), Expect = 0.93
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 LHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIAN-DNFIDNLYVKTNDQSLV 500
L+S L +R+ V S P NH + I N+ PD+ N NF +N+ K + SL+
Sbjct: 503 LNSLLNSLRNLYQFVLTKSNPTNHNATTNTEPISNIEPDLLNSSNFTENIIDKDKNNSLI 562
Query: 501 V 503
+
Sbjct: 563 I 563
>UniRef50_UPI00015B5544 Cluster: PREDICTED: similar to
ENSANGP00000016612; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000016612 - Nasonia
vitripennis
Length = 499
Score = 33.5 bits (73), Expect = 3.8
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +3
Query: 180 EDL*TCSK*NWCRGG*RSGSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYL 359
EDL ++ W R G SGS + D + TV + SQR+ ++ G + L D
Sbjct: 54 EDLGVQTRVRWYRAGQSSGSNILLADSDEPTVSTASQRV--KMWGNRSLELVQVRPEDSG 111
Query: 360 VQVGQGSLPMNHQIIYQLQDIFNLLP 437
V Q S P+ + Q+ +I + P
Sbjct: 112 EYVCQASRPVPWGAVTQVYEIQVMYP 137
>UniRef50_Q88VZ1 Cluster: Putative uncharacterized protein lp_1886;
n=1; Lactobacillus plantarum|Rep: Putative
uncharacterized protein lp_1886 - Lactobacillus
plantarum
Length = 347
Score = 33.5 bits (73), Expect = 3.8
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Frame = +3
Query: 297 TNQLLGL-KGLHSQLTEIRDYLVQVGQGS------LPMNHQIIYQLQDIFNLLPDIANDN 455
T QL + + H +++ +R++L++V S + +NH+I QL IF PDIAN +
Sbjct: 259 TQQLAAIAQTRHLKMSTVREHLLEVAIWSPDFPFEMVLNHEITQQLATIFAAQPDIANWS 318
Query: 456 F 458
F
Sbjct: 319 F 319
>UniRef50_Q8ESP6 Cluster: Putative uncharacterized protein OB0578;
n=1; Oceanobacillus iheyensis|Rep: Putative
uncharacterized protein OB0578 - Oceanobacillus
iheyensis
Length = 421
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 288 QRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
Q + N L LK LHSQ+ EIR ++ + +NH ++ Q+ I N
Sbjct: 15 QTLLNTLQSLKPLHSQILEIRCISLKSNNLTKDINHPLLEQISPIDN 61
>UniRef50_O43060 Cluster: Translation initiation factor eIF3f; n=16;
Ascomycota|Rep: Translation initiation factor eIF3f -
Schizosaccharomyces pombe (Fission yeast)
Length = 302
Score = 32.7 bits (71), Expect = 6.6
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 RSGSRAFVKDIKDTT-VGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQII 404
RSG +A D + + SL + L S + + DY+ V GS P N +
Sbjct: 190 RSGLKAVAAPKNDPSRLASLFTDLQQLRRSTLELLSMIERVSDYVQNVIDGSSPANVAVG 249
Query: 405 YQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
L F+L+P + +F D +VVYL
Sbjct: 250 RYLMKCFSLIPCVEGQDFEKIFSSHLQDVLVVVYL 284
>UniRef50_A5V4S7 Cluster: Regulatory protein, LuxR; n=1;
Sphingomonas wittichii RW1|Rep: Regulatory protein, LuxR
- Sphingomonas wittichii RW1
Length = 878
Score = 32.3 bits (70), Expect = 8.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 31 QNDIAINELIRRYCPNSVLVIIDAKPKDLGLP-TEAYQAVEEVHDD 165
+ND+ + E++R PN ++V+ DLGL AY A+ EV D
Sbjct: 146 ENDLVLREILRLAPPNLLIVLSSRAYPDLGLARLRAYSAMAEVDFD 191
>UniRef50_Q241B7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1239
Score = 32.3 bits (70), Expect = 8.7
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +3
Query: 264 DTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDI 443
D+ S +T Q+L K ++ +D + Q + + QL++ F+ L
Sbjct: 914 DSKKSYYSNFLTKQMLSTKNQQGNFSDRQDKSISANQTERSIKQGRLIQLKNDFDNLSSS 973
Query: 444 ANDNFIDNLYVKTNDQSL 497
ND+F + + +N QSL
Sbjct: 974 QNDSFTKSELLLSNSQSL 991
>UniRef50_Q23JI0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 4769
Score = 32.3 bits (70), Expect = 8.7
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 291 RITNQLLGL-KGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNFIDN 467
++ +QL+ L K L+S+ + R Y+ Q+ Q S+ +N I+ Q IFN++ + + F +
Sbjct: 561 QLQHQLIELYKQLNSEFS--RYYVSQIQQQSVRIN-DIMQMQQIIFNMIETLIKNIFDNQ 617
Query: 468 LYVKTNDQSL 497
LYV ++SL
Sbjct: 618 LYVFMQEKSL 627
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,026,998
Number of Sequences: 1657284
Number of extensions: 9159429
Number of successful extensions: 20978
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 20412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20969
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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