Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0664
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   0.82 
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   1.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 237 SHFFSLLCTNFTWNMFK--GPRSWCTIIVYFLYCLVSF 130
           S  F L+  N   + F+    +S+CT +   +YC V+F
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 396 QIIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLLL 515
           QIIY+L  I N+  D+  ++    +  + N   L++ +L+
Sbjct: 7   QIIYELDSIRNIFSDVLEESQTLEILKRLNRVVLILKVLV 46


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 396 QIIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLLL 515
           QIIY+L  I N+  D+  ++    +  + N   L++ +L+
Sbjct: 67  QIIYELDSIRNIFSDVLEESQTLEILKRLNRVVLILKVLV 106


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 396 QIIYQLQDIFNLLPDIANDNFIDNLYVKTNDQSLVVYLLL 515
           QIIY+L  I N+  D+  ++    +  + N   L++ +L+
Sbjct: 67  QIIYELDSIRNIFSDVLEESQTLEILKRLNRVVLILKVLV 106


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 219 LCTNFTWNMFKGPRSWCTIIVYFLYCLVSF 130
           +C NF +        +   + Y LYC  SF
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 312 GLKGLHSQLTEIRD 353
           G+KGLH  +T + D
Sbjct: 151 GVKGLHGPITRVID 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,845
Number of Sequences: 336
Number of extensions: 2406
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)