Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0664
(585 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 136 4e-32
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 136 4e-32
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 131 2e-30
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 48 3e-05
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 48 3e-05
BC093767-1|AAH93767.1| 1261|Homo sapiens Rho GTPase activating p... 30 6.9
BC093741-1|AAH93741.1| 1261|Homo sapiens Rho GTPase activating p... 30 6.9
BC067839-1|AAH67839.1| 411|Homo sapiens ARHGAP29 protein protein. 30 6.9
BC022483-1|AAH22483.1| 393|Homo sapiens ARHGAP29 protein protein. 30 6.9
AL162735-2|CAH71751.1| 393|Homo sapiens Rho GTPase activating p... 30 6.9
AL162735-1|CAH71750.1| 1261|Homo sapiens Rho GTPase activating p... 30 6.9
AB208873-1|BAD92110.1| 1252|Homo sapiens PTPL1-associated RhoGAP... 30 6.9
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 136 bits (330), Expect = 4e-32
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTF 189
HTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VEEVHDDGTPTS+TF
Sbjct: 96 HTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTF 155
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
EHV SEI HLLR
Sbjct: 156 EHVTSEIGAEEAEEVGVEHLLR 177
Score = 128 bits (310), Expect = 1e-29
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKDTTVG+LSQRITNQ+ GLKGL+S+L +IR YL +V G LP+NHQIIYQL
Sbjct: 171 GVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQL 230
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QD+FNLLPD++ F+ Y+KTNDQ +VVYL
Sbjct: 231 QDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYL 262
Score = 46.4 bits (105), Expect = 7e-05
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
A+L+RS++ALHNLINNKI NRDAE+
Sbjct: 263 ASLIRSVVALHNLINNKIANRDAEK 287
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 136 bits (330), Expect = 4e-32
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTF 189
HTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VEEVHDDGTPTS+TF
Sbjct: 96 HTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTF 155
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
EHV SEI HLLR
Sbjct: 156 EHVTSEIGAEEAEEVGVEHLLR 177
Score = 128 bits (310), Expect = 1e-29
Identities = 59/92 (64%), Positives = 74/92 (80%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKDTTVG+LSQRITNQ+ GLKGL+S+L +IR YL +V G LP+NHQIIYQL
Sbjct: 171 GVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQL 230
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QD+FNLLPD++ F+ Y+KTNDQ +VVYL
Sbjct: 231 QDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYL 262
Score = 46.4 bits (105), Expect = 7e-05
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
A+L+RS++ALHNLINNKI NRDAE+
Sbjct: 263 ASLIRSVVALHNLINNKIANRDAEK 287
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 131 bits (316), Expect = 2e-30
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = +3
Query: 234 GSRAFVKDIKDTTVGSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQL 413
G ++DIKDTTVG+LSQRITNQ+ GLKGL+S+L +IR YL +VG G LP+NHQIIYQL
Sbjct: 171 GVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVGTGKLPINHQIIYQL 230
Query: 414 QDIFNLLPDIANDNFIDNLYVKTNDQSLVVYL 509
QD+FNLLPD++ F+ Y+KTNDQ +VVYL
Sbjct: 231 QDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYL 262
Score = 130 bits (315), Expect = 3e-30
Identities = 61/82 (74%), Positives = 66/82 (80%)
Frame = +1
Query: 10 HTGPKLHQNDIAINELIRRYCPNSVLVIIDAKPKDLGLPTEAYQAVEEVHDDGTPTSRTF 189
HTGPKLH+NDIAINEL++RYCPNSVLVIID KPKDLGLPTEAY +VEE DDGTPTS+TF
Sbjct: 96 HTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEDQDDGTPTSKTF 155
Query: 190 EHVPSEIXXXXXXXXXXXHLLR 255
EHV SEI HLLR
Sbjct: 156 EHVTSEIGAEEAEEVGVEHLLR 177
Score = 46.4 bits (105), Expect = 7e-05
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = +2
Query: 509 AALVRSIIALHNLINNKITNRDAEE 583
A+L+RS++ALHNLINNKI NRDAE+
Sbjct: 263 ASLIRSVVALHNLINNKIANRDAEK 287
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 47.6 bits (108), Expect = 3e-05
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = +3
Query: 279 SLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNF 458
++++ + Q +K LHS++ I +Y+ G +P NH+I+ + + + LP ++ D F
Sbjct: 186 TVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKF 245
Query: 459 IDNLYVKTNDQSLVVYL 509
+ Y + ND L+ YL
Sbjct: 246 KTDFYDQCNDVGLMAYL 262
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 47.6 bits (108), Expect = 3e-05
Identities = 22/77 (28%), Positives = 43/77 (55%)
Frame = +3
Query: 279 SLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFNLLPDIANDNF 458
++++ + Q +K LHS++ I +Y+ G +P NH+I+ + + + LP ++ D F
Sbjct: 216 TVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKF 275
Query: 459 IDNLYVKTNDQSLVVYL 509
+ Y + ND L+ YL
Sbjct: 276 KTDFYDQCNDVGLMAYL 292
>BC093767-1|AAH93767.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>BC093741-1|AAH93741.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>BC067839-1|AAH67839.1| 411|Homo sapiens ARHGAP29 protein protein.
Length = 411
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>BC022483-1|AAH22483.1| 393|Homo sapiens ARHGAP29 protein protein.
Length = 393
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>AL162735-2|CAH71751.1| 393|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 393
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>AL162735-1|CAH71750.1| 1261|Homo sapiens Rho GTPase activating
protein 29 protein.
Length = 1261
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 18 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 68
>AB208873-1|BAD92110.1| 1252|Homo sapiens PTPL1-associated RhoGAP 1
variant protein.
Length = 1252
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 276 GSLSQRITNQLLGLKGLHSQLTEIRDYLVQVGQGSLPMNHQIIYQLQDIFN 428
G LS IT +GLK L S DY+ ++ +H ++Y + IF+
Sbjct: 9 GQLSTDITTSEMGLKSLSSNSIFDPDYIKELVNDIRKFSHMLLYLKEAIFS 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,842,379
Number of Sequences: 237096
Number of extensions: 1425052
Number of successful extensions: 6517
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6517
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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